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Series GSE82479

Query DataSets for GSE82479

Status

Public on Jun 22, 2016

Title

ChIP-seq from forebrain (ENCSR161UUY)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K9ac ChIP-seq on embryonic 12.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR161UUY/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Jun 07, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21103

Illumina HiSeq 4000 (Mus musculus)

Samples (2)

GSM2191266	ChIP-seq from forebrain (ENCLB714JHS)
GSM2191267	ChIP-seq from forebrain (ENCLB731NVJ)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE82479_ENCFF111SQJ_fold_change_over_control_mm10.bigWig	1022.3 Mb	(ftp)(http)	BIGWIG
GSE82479_ENCFF151ICU_peaks_mm10.bigBed	3.1 Mb	(ftp)(http)	BIGBED
GSE82479_ENCFF210QUL_signal_p-value_mm10.bigWig	933.2 Mb	(ftp)(http)	BIGWIG
GSE82479_ENCFF572YAQ_replicated_peaks_mm10.bed.gz	714.7 Kb	(ftp)(http)	BED
GSE82479_ENCFF761XQC_peaks_mm10.bed.gz	1.3 Mb	(ftp)(http)	BED
GSE82479_ENCFF891TZR_replicated_peaks_mm10.bigBed	1.8 Mb	(ftp)(http)	BIGBED
GSE82479_RAW.tar	2.1 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record