|
| Status |
Public on Sep 12, 2016 |
| Title |
Gene expression data from NRAS-driven CNS-PNET zebrafish brain tumors and normal brain. |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Zebrafish CNS-PNET tumors were generated by activating NRAS in oligoneural precursor cells. Gene expression in the zebrafish brain tumors and normal zebrafish brain was analyzed by RNA-seq.
|
| |
|
| Overall design |
RNA-seq was performed on 7 zebrafish brain tumors and 8 normal brain samples on Illumina HiSeq 2000 using 50 Cycle Single-Read Sequencing v3 kit.
|
| |
|
| Contributor(s) |
Modzelewska K, Stewart R |
| Citation(s) |
27783941 |
| Submission date |
Apr 28, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Rodeny Stewart |
| E-mail(s) |
rodney.stewart@hci.utah.edu
|
| Organization name |
University of Utah
|
| Department |
Oncological Sciences
|
| Street address |
2000 Circle of Hope Dr
|
| City |
Salt Lake City |
| State/province |
UT |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14875 |
Illumina HiSeq 2000 (Danio rerio) |
|
| Samples (15)
|
|
| Relations |
| BioProject |
PRJNA319956 |
| SRA |
SRP074122 |
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