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Series GSE74416 Query DataSets for GSE74416
Status Public on Jan 01, 2018
Title Gene expression alteration associated with early embryonic MeHg exposure in zebrafish (Danio rerio)
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Methylmercury (MeHg) is an environmental neurotoxicant known to cause adverse effects in fish, such as locomotor abnormalities, visual deficits or teratogenesis. However, very few studies have investigated the effects of environmentally realistic MeHg exposures on the gene expression of fish embryos. Since the primary source of MeHg exposure in wild fish is through the diet, this study analyzed differential gene expression in zebrafish embryos from parents that had been subjected to environmentally relevant dietary MeHg exposures (0, 1, 3, and 10ppm) throughout their whole life cycle.
 
Overall design Parental generations of zebrafish were exposed to environmentally realistic MeHg dietary regimes (0, 1, 3, and 10ppm) throughout their whole life cycles. Upon reaching adulthood, their offspring was analyzed for gene expression alteration.
 
Contributor(s) Mora FX, Carvan MJ, Klingler R, Walz ME
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 27, 2015
Last update date May 15, 2019
Contact name Francisco Xavier Mora Zamorano
E-mail(s) fmora@whoi.edu
Phone 4145733397
Organization name University of Wisconsin - Milwaukee
Department School of Freshwater Sciences
Street address 600 E Greenfield Ave
City Milwaukee
State/province WI
ZIP/Postal code 53204
Country USA
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (12)
GSM1920167 CTRL1
GSM1920168 CTRL2
GSM1920169 CTRL3
Relations
BioProject PRJNA300316
SRA SRP065358

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74416_embryo_count.txt.gz 1.0 Mb (ftp)(http) TXT
GSE74416_embryo_fpkm.txt.gz 1.3 Mb (ftp)(http) TXT
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Processed data are available on Series record
Raw data are available in SRA

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