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Series GSE66362 Query DataSets for GSE66362
Status Public on Apr 21, 2016
Title RNA-seq of zebrafish brain, liver and skin during perturbation with rotenone at young and old age
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Zebrafish of two different age groups (12 and 36 months) were treated with low amounts of rotenone (mild stress) and compared to untreated zebrafish. Two different durations were used (3 and 8 weeks). Illumina sequencing (HiSeq2000) was applied to generate 50bp single-end reads.

Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
 
Overall design 68 sample: 3 tissues (brain, liver, skin); 2 age groups (12 and 36 months); controls and rotenone treated samples; 2-6 biological replicates for each group
 
Contributor(s) Hartmann N, Priebe S, Groth M, Platzer M, Englert C
Citation(s) 27135165
Submission date Feb 27, 2015
Last update date May 15, 2019
Contact name JenAge Project
E-mail(s) geo-data@jenage.de
Organization name Leibniz Institute for Age Research - Fritz Lipmann Institute
Street address Beutenbergstr. 11
City Jena
ZIP/Postal code D-07745
Country Germany
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (68)
GSM1620930 brain157 12m control 3w rep1
GSM1620931 brain158 12m control 3w rep2
GSM1620932 brain159 12m control 3w rep3
Relations
BioProject PRJNA276667
SRA SRP055573

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66362_danrer_counts_rpkm.xls.gz 22.8 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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