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| Status |
Public on Dec 19, 2014 |
| Title |
Host-specific transcriptomic pattern of Trichoderma virens during interaction with maize or tomato roots |
| Organism |
Trichoderma virens |
| Experiment type |
Expression profiling by array
|
| Summary |
To test the hypothesis that gene expression by the fungal partner in this beneficial interaction is modulated by the plant host, Trichoderma virens was co-cultured with maize or tomato in a hydroponic system allowing interaction with the roots. The transcriptomes for T. virens alone were compared with fungus-inoculated tomato or maize roots by hybridization on oligonucleotide microarrays
Based on the relevant role of Trichoderma virens as a biological control agent this study provides a better knowledge of its crosstalk with plants in a host-specific manner.
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| Overall design |
Trichoderma virens was co-cultured for three days with maize or tomato in a hydroponic system allowing interaction with the roots. 3 experiments were performed for each treatment, and compared to 5 experiments with T. virens grown under the same conditions without plants.
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| Contributor(s) |
Moran-Diez ME, Trushina N, Kenerley CM, Horwitz BA |
| Citation(s) |
25608961 |
| Submission date |
Dec 18, 2014 |
| Last update date |
Mar 23, 2015 |
| Contact name |
Benjamin A Horwitz |
| E-mail(s) |
horwitz@tx.technion.ac.il
|
| Phone |
48293976
|
| Organization name |
Technion
|
| Department |
Biology
|
| Street address |
Dept Biology Technion
|
| City |
Haifa |
| State/province |
Israel |
| ZIP/Postal code |
32000 |
| Country |
Israel |
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| Platforms (1) |
| GPL19568 |
Agilent-027310 Trichoderma virens WG GE Microarray |
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| Samples (11)
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| Relations |
| BioProject |
PRJNA270774 |
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