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Series GSE61258 Query DataSets for GSE61258
Status Public on Nov 03, 2014
Title Human Liver Illumina Inf 450 DNA methylation data
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiles of human Liver tissue. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 485,000 CpGs. Dataset includes 79 samples from Germany. The goal of the study was to evalute the relationship between body mass index and DNA methylation levels.
 
Overall design Bisulphite converted DNA from the 79 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip.
 
Contributor(s) Horvath S, Hampe J, Ammerpohl O
Citation(s) 25313081
Submission date Sep 09, 2014
Last update date Mar 22, 2019
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (79)
GSM1500908 genomic DNA from human liver of subject S11a10882
GSM1500909 genomic DNA from human liver of subject S11a10bc2
GSM1500910 genomic DNA from human liver of subject S11a10bf2
This SubSeries is part of SuperSeries:
GSE61256 Obesity accelerates epigenetic aging of human liver
Relations
BioProject PRJNA260613

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61258_RAW.tar 183.1 Mb (http)(custom) TAR
GSE61258_datSignalAndBFinalLiver.csv.gz 324.9 Mb (ftp)(http) CSV
GSE61258_methylationLiver_Explanation_of_characteristic_variables2.pdf.gz 183.3 Kb (ftp)(http) PDF
Processed data included within Sample table
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