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Series GSE58280 Query DataSets for GSE58280
Status Public on Sep 10, 2014
Title Multi-Omic Integrated networks connect DNA methylation and miRNA with skeletal muscle plasticity to chronic exercise in type 2 diabetic obesity [Methylation data]
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Analysis of skeletal muscle DNA methylation from type 2 diabetic volunteers before and after 16 weeks of chronic exercise training (two groups, one undergoing aerobic excercise and the other resistance training exercise)
 
Overall design A biopsy was collected from the right Vastus Lateralis under local anaesthesia andGenomic DNA was extracted from 5-10 mg muscle, Bisulphite conversion (Illumina) was checked using methylation specific PCR. 4 μl of bisulphite-converted DNA was used for hybridization on Infinium Human Methylation 450 BeadChip (Illumina)
 
Contributor(s) Rowlands D, Giri M
Citation(s) 25138607
Submission date Jun 06, 2014
Last update date Mar 22, 2019
Contact name David Rowlands
E-mail(s) D.S.Rowlands@massey.ac.nz
Organization name Massey University
Department Institute of Food, Nutrition and Human Health
Lab Dr. David Rowlands
Street address 63 Wallace St Mt Cook
City Wellington
State/province Wellington
ZIP/Postal code 6011
Country New Zealand
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (34)
GSM1405735 007-Pre
GSM1405736 007-Post
GSM1405737 026-Pre
This SubSeries is part of SuperSeries:
GSE58250 Multi-Omic Integrated networks connect DNA methylation and miRNA with skeletal muscle plasticity to chronic exercise in type 2 diabetic obesity
Relations
BioProject PRJNA251886

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58280_RAW.tar 183.1 Mb (http)(custom) TAR
GSE58280_beta.txt.gz 123.8 Mb (ftp)(http) TXT
GSE58280_signal_intensities.txt.gz 83.7 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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