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Series GSE56024 Query DataSets for GSE56024
Status Public on Nov 17, 2014
Title Transcriptomic responses to emamectin benzoate in Pacific and Atlantic Canada salmon lice Lepeophtheirus salmonis with differing levels of drug resistance
Organism Lepeophtheirus salmonis
Experiment type Expression profiling by array
Summary This study investigates the baseline or inducible differences in between populations of Atlantic salmon lice Lepeophtheirus salmonis with differing levels of resistance to the parasiticidal drug emamectin benzoate (EMB), as well as the induced effects of EMB exposure to Pacific salmon lice. F1 generation lice were exposed in bioassays to a dilution series of emamectin benzoate.
 
Overall design Two separate experiments were conducted, one for Atlantic and one for Pacific salmon lice (to be analyzed separately). Atlantic pre-adult salmon lice, separated into male and female, and sensitive or resistant to EMB populations, and exposed to a dilution series: 0 (control), 0.1, 25, 300, and 1000 parts per billion EMB. For each combination four biological replicates were included, except male resistant 25 (n = 3) and female resistant 300 (n = 2). Pacific pre-adult lice of both sexes were exposed to a dilution series: 0 (control), 25, 50 parts per billion EMB.
 
Contributor(s) Sutherland BJ, Poley JD, Igboeli OO, Jantzen JR, Fast MD, Koop BF, Jones SR
Citation(s) 25685190, 27377915
Submission date Mar 19, 2014
Last update date Sep 25, 2019
Contact name Ben F Koop
E-mail(s) bkoop@uvic.ca
Phone (250) 472-4067
Organization name The University of Victoria
Department Biology
Lab Centre for Biomedical Research
Street address PO Box 3020 STN CSC
City Victoria
State/province BC
ZIP/Postal code V8W 3N5
Country Canada
 
Platforms (1)
GPL15566 GiLS Lepeophtheirus salmonis
Samples (95)
GSM1350577 atl_f-res300-rep1
GSM1350578 atl_f-res0-rep1
GSM1350579 atl_m-res0.1-rep1
Relations
BioProject PRJNA242239

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56024_RAW.tar 882.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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