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Series GSE54758 Query DataSets for GSE54758
Status Public on Dec 31, 2014
Title DNA methylation, H3K27me3, and gene expression statuses of human cancer cell lines and normal cells.
Organism Homo sapiens
Experiment type Expression profiling by array
Methylation profiling by genome tiling array
Genome binding/occupancy profiling by genome tiling array
Summary DNA methylation, H3K27me3, and gene expression statuses in cancer cell lines and normal cells.
 
Overall design DNA methylation, H3K27me3, and gene expression statuses of cancer cell lines were compared to those in normal cells in three different tissues.
 
Contributor(s) Takeshima H
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Submission date Feb 06, 2014
Last update date Mar 22, 2019
Contact name Hideyuki Takeshima
E-mail(s) takeshima.hideyuki@hoshi.ac.jp
Organization name Hoshi University
Department Institute for Advanced Life Sciences
Lab Department of Epigenomics
Street address 2-4-41 Ebara
City Shinagawa-ku
State/province Tokyo
ZIP/Postal code 142-8501
Country Japan
 
Platforms (3)
GPL9767 Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Probe Name version)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (24)
GSM1323567 Gene expression in Du145
GSM1323568 Gene expression in PC3
GSM1323569 Gene expression in RWPE1
Relations
BioProject PRJNA237611

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54758_RAW.tar 526.5 Mb (http)(custom) TAR (of TXT)
GSE54758_unmethylated_and_methylated.txt.gz 38.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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