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Series GSE53022 Query DataSets for GSE53022
Status Public on Dec 06, 2013
Title Expression profiling in the heart of wild-type and kctd10 mutant zebrafish larvae
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary We sequenced mRNA of hearts from 50 wild-type and 50 kctd10 mutant embryos at 48 hpf.
 
Overall design Examination of mRNA levels in the larvae hearts between the the wt and the kctd10 mutant.
 
Contributor(s) Tong X, Zhang B
Citation(s) 24430697
Submission date Dec 05, 2013
Last update date May 15, 2019
Contact name Xiangjun Tong
E-mail(s) xiangjuntong@pku.edu.cn
Phone 86-10-62750780
Organization name Peking University
Department College of Life Sciences
Street address Yiheyuan Road No. 5
City Beijing
ZIP/Postal code 100871
Country China
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (2)
GSM1280515 wt zebrafish heart
GSM1280516 kctd10 mut zebrafish heart
Relations
BioProject PRJNA230686
SRA SRP033532

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53022_gene_expression_examined_by_deep_seq_in_kctd10_mutant.xlsx.gz 1.9 Mb (ftp)(http) XLSX
GSE53022_mt_vs_wt.DESeq.txt.gz 1.9 Mb (ftp)(http) TXT
GSE53022_rawCountsTable.txt.gz 178.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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