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| Status |
Public on Jun 04, 2008 |
| Title |
Expression data from Helicobacter positive and negative human gastritis samples |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
The whole-genome oligonucleotide microarray analysis gives an opportunity for studying the unidentified gene expression background of the idiopathic and H.pylori related gastric erosive alterations. Using microarrays we compared the whole genome gene expression profile of HP+ and HP- gastric erosions and normal adjacent mucosa to explain the possible role and response to HP infection and to get morphology related mRNA expression patterns.
Keywords: whole genomic expression
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| Overall design |
Total RNA was extracted from frozen gastric biopsy specimens of patients with Helicobacter pylori positive (HP+) and Helicobacter pylori negative (HP-) antrum erosions (ER+), and the corresponding, adjacent normal mucosae (ER-) and hybridized on Affymetrix HGU133 Plus 2.0 microarrays
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| Contributor(s) |
Galamb O, Győrffy B, Tulassay Z, Molnár B, Spisák S |
| Citation(s) |
18321301 |
| Submission date |
Jun 14, 2006 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Norbert Solymosi |
| E-mail(s) |
solymosi.norbert@gmail.com
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| Phone |
36309347069
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| Organization name |
ATE
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| Street address |
István u. 2.
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| City |
Budapest |
| State/province |
Budapest |
| ZIP/Postal code |
1078 |
| Country |
Hungary |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (32)
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| GSM114507 |
Gastric biopsy HP- ER+, sample4 |
| GSM114508 |
Gastric biopsy HP- ER+, sample5 |
| GSM114509 |
Gastric biopsy HP- ER+, sample6 |
| GSM114510 |
Gastric biopsy HP- ER+, sample7 |
| GSM114511 |
Gastric biopsy HP- ER+, sample8 |
| GSM114512 |
Gastric biopsy HP+ ER+, sample1 |
| GSM114513 |
Gastric biopsy HP+ ER+, sample2 |
| GSM114514 |
Gastric biopsy HP+ ER+, sample3 |
| GSM114515 |
Gastric biopsy HP+ ER+, sample4 |
| GSM114516 |
Gastric biopsy HP+ ER+, sample5 |
| GSM114517 |
Gastric biopsy HP+ ER+, sample6 |
| GSM114518 |
Gastric biopsy HP+ ER+, sample7 |
| GSM114519 |
Gastric biopsy HP+ ER+, sample8 |
| GSM114520 |
Gastric biopsy HP+ ER-, sample1 |
| GSM114521 |
Gastric biopsy HP+ ER-, sample2 |
| GSM114522 |
Gastric biopsy HP+ ER-, sample3 |
| GSM114523 |
Gastric biopsy HP+ ER-, sample4 |
| GSM114524 |
Gastric biopsy HP+ ER-, sample5 |
| GSM114525 |
Gastric biopsy HP+ ER-, sample6 |
| GSM114526 |
Gastric biopsy HP+ ER-, sample7 |
| GSM114527 |
Gastric biopsy HP+ ER-, sample8 |
| GSM114528 |
Gastric biopsy HP- ER-, sample1 |
| GSM114529 |
Gastric biopsy HP- ER-, sample2 |
| GSM114530 |
Gastric biopsy HP- ER-, sample3 |
| GSM114531 |
Gastric biopsy HP- ER-, sample4 |
| GSM114532 |
Gastric biopsy HP- ER-, sample5 |
| GSM114533 |
Gastric biopsy HP- ER-, sample6 |
| GSM114534 |
Gastric biopsy HP- ER-, sample7 |
| GSM114535 |
Gastric biopsy HP- ER-, sample8 |
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| Relations |
| BioProject |
PRJNA95379 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE5081_RAW.tar |
259.9 Mb |
(http)(custom) |
TAR (of CEL) |
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