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Series GSE49959 Query DataSets for GSE49959
Status Public on Apr 16, 2015
Title Expression data from larvae body wall expressing LaminC transgenes
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Expression of mutant lamins in human muscle causes muscular dystrophy. We have generated a drosophila model that expresses mutant lamins, modeled after those that cause disease in humans.
We used affymetrix microarrays to determine the global changes in gene expression caused by mutant lamins.
 
Overall design Dissected 3rd instar larval body wall from transgenic Drosophila expressing either a full length wildtype Lamin C, an N-terminal Lamin C truncation of the first 42 amino acids or a single amino acid substitution in Lamin C at position 489 from a G residue to a V residue under control of the Gal4-UAS.
RNA was extracted from 3rd instar larval body wall expressing these mutant Lamin C transgenes and microarray analysis using Affymetrix microarrays.
 
Contributor(s) Dialynas G, Thiemann D, Shrestha OK, Wallrath LL
Citation(s) 25996830
Submission date Aug 18, 2013
Last update date May 04, 2018
Contact name Thomas B Bair
E-mail(s) iihg-bioinformatics@uiowa.edu
Organization name University of Iowa
Street address 335 EMRB
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
 
Platforms (1)
GPL1322 [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array
Samples (9)
GSM1210834 LaminC wildtype_larvae, biological rep 1
GSM1210835 LaminC DN_larvae, biological rep 1
GSM1210836 LaminC G489V_larvae, biological rep 1
Relations
BioProject PRJNA215688

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49959_RAW.tar 17.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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