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| Status |
Public on May 07, 2013 |
| Title |
Gene expression profile of response to auxin at 3 h after treatment in rice root tips: IR64 vs Dro1-NIL |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
Gene expression profile of response to auxin at 3 h after treatment in rice root tips: IR64 (loss-of-function of DRO1 type) vs Near-isogenic line homozygous for the Kinandang Patong allele of DRO1 in an IR64 genetic background (Dro1-NIL; gain-of-function of DRO1 type)
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| Overall design |
We used two rice varieties, IR64 and near-isogenic line homozygous for the Kinandang Patong allele of DRO1 in an IR64 genetic background (Dro1-NIL). We performed comprehensive microarray analysis of rice root tips with auxin treatment (3h) and pre-treatment (0h) in IR64 and Dro1-NIL. Seedling root tips of IR64 and Dro1-NIL were treated with 10 µM 2,4-D. n = 3 biological repeats (15 seedlings per repeat).
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| Contributor(s) |
Uga Y |
| Citation(s) |
23913002 |
| Submission date |
Apr 22, 2013 |
| Last update date |
Aug 06, 2013 |
| Contact name |
Yusaku Uga |
| E-mail(s) |
yuga@affrc.go.jp
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| Organization name |
National Institute of Agrobiological Sciences
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| Street address |
2-1-2, Kannondai
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| City |
Tsukuba |
| ZIP/Postal code |
305-8602 |
| Country |
Japan |
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| Platforms (1) |
| GPL6864 |
Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA198471 |
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