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| Status |
Public on Sep 19, 2012 |
| Title |
Agilent 44K Rice Oligo DNA Microarray RAP-DB (G2519F#15241); genome-wide transcriptional analysis of Aluminum-responsive genes in rice (Oryza sativa). |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
|
| Summary |
By comparing transcriptional profiling between a wild-type rice and an Al-sensitive rice mutant star1, we found that rice possesses novel mechanisms of Al-tolerance in addition to ART1-regulated mechanism in rice.
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| Overall design |
The transcriptional profiling between the wild-type rice and an Al-sensitive mutant, star1. +Al vs. -Al in the roots of wild-type rice and star1 mutant. Biological replicates: +Al/-Al WT root tip 4 replicates, +Al/-Al WT basal tip 4 replicates, +Al/-Al star1 root tip 4 replicates, +Al/-Al star1 basal tip 4 replicates
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| Contributor(s) |
Tsutsui T, Yamaji N, Huang C, Motoyama R, Nagamura Y, Ma JF |
| Citation(s) |
23110212 |
| Submission date |
Sep 18, 2012 |
| Last update date |
Dec 06, 2012 |
| Contact name |
Tomokazu Tsutsui |
| E-mail(s) |
ttsutsui@biol.s.u-tokyo.ac.jp
|
| Phone |
81-3-5841-4471
|
| Organization name |
The university of tokyo
|
| Department |
Biological Sciences
|
| Lab |
Developmental Cell Biology
|
| Street address |
Room 02 (BF), Faculty of Science Building 2, 7-3-1 Hongo
|
| City |
Bunkyo-ku |
| State/province |
Tokyo |
| ZIP/Postal code |
1130033 |
| Country |
Japan |
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| Platforms (1) |
| GPL6864 |
Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) |
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| Samples (16)
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| Relations |
| BioProject |
PRJNA175437 |
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