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Series GSE39425 Query DataSets for GSE39425
Status Public on Dec 03, 2012
Title Continuous gene expression profile of root at nighttime throughout the entire growth of rice in the field
Platform organism Oryza sativa
Sample organism Oryza sativa Japonica Group
Experiment type Expression profiling by array
Summary A continuous gene expression profiling of roots was performed during nighttime at regular interval from transplanting until harvesting to characterize the transcriptional and physiological changes in the root system of rice throughout the entire growth under natural field conditions.
 
Overall design Roots were sampled at nighttime (24:00) at 7-day intervals encompassing 14 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.
 
Contributor(s) Sato Y, Takehisa H, Antonio B, Namiki N, Nagamura Y
Citation(s) 23180765, 23180784
Submission date Jul 17, 2012
Last update date Dec 06, 2012
Contact name Yutaka Sato
E-mail(s) satoyu@affrc.go.jp
Organization name National Institute of Agrobiological Sciences
Street address 2-1-2 Kannondai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8602
Country Japan
 
Platforms (1)
GPL6864 Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version)
Samples (14)
GSM534612 Root_27DAT_24:00_rep1
GSM534618 Root_76DAT_24:00_rep1
GSM968087 Root_13DAT_24:00
Relations
BioProject PRJNA170873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39425_RAW.tar 110.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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