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Series GSE35502 Query DataSets for GSE35502
Status Public on Feb 03, 2012
Title Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport
Platform organism Oryza sativa
Sample organism Oryza sativa Japonica Group
Experiment type Expression profiling by array
Summary OsNRAMP5 is involved in iron, manganese and cadmium transport. Goal was to determine the effects of knocking down OsNRAMP5 on global rice gene expression.
 
Overall design Two experiments:
Control condition experiment: root or shoot of WT vs. OsNRAMP5 RNAi plants.
WT Cd treatment experiment: 4 weeks old WT plants grown under 0 or 10uM Cd for two weeks
 
Contributor(s) Ishimaru Y
Citation(s) 22368778
Submission date Feb 02, 2012
Last update date Jan 09, 2014
Contact name Yasuhiro Ishimaru
E-mail(s) yasrnr@m.tohoku.ac.jp
Phone +81-22-795-6557
Fax +81-22-795-6557
Organization name Tohoku University
Street address 6-3 Aramakiaza-aoba, Aoba-ku, Sendai
City Miyagi
ZIP/Postal code 980-8578
Country Japan
 
Platforms (1)
GPL8852 Agilent-015241 Rice Gene Expression 4x44K Microarray (Probe name version)
Samples (20)
GSM869813 iR/WR-rep1
GSM869814 iR/WR-rep2
GSM869815 iR/WR-rep3
Relations
BioProject PRJNA152307

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35502_RAW.tar 281.0 Mb (http)(custom) TAR (of TXT)
GSE35502_Results.xls.gz 21.1 Mb (ftp)(http) XLS
Processed data included within Sample table
Processed data are available on Series record

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