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| Status |
Public on Dec 26, 2012 |
| Title |
Transcriptional changes in response to oxidative stress in combination with temperature extremes in rice |
| Platform organism |
Oryza sativa |
| Sample organism |
Oryza sativa Indica Group |
| Experiment type |
Expression profiling by array
|
| Summary |
Genome wide expression profiles of 10-day-old seedlings in response to prior exposure with OS followed by heat stress or cold stress as well simultaneous exposure to OS along with HS/CS was done to study the transcriptional changes in response to combination of stresses.
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| Overall design |
10-day old rice seedlings were used for experiments. Transcript profiling was done in 10-day old rice seedling following oxidative Stress prior to High Temperature Stress (PO_HS) or Low Temperature Stress (PO_CS) and Oxidative Stress during High Temperature Stress (DO_HS)/ during Low temperature stress (DO_CS). Unstressed seedlings were used as control. For each condition, three biological replicates were processed in a similar manner for the microarray analysis.
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| |
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| Contributor(s) |
Mittal D, Grover A |
| Citation(s) |
23116677 |
| Submission date |
Oct 08, 2011 |
| Last update date |
Jan 09, 2014 |
| Contact name |
Anil Grover |
| E-mail(s) |
anil.anilgrover@gmail.com
|
| Phone |
91-11-24117693
|
| Fax |
91-11-24115270
|
| URL |
http://www.south.du.ac.in/dpmb/index.php?page=anil-grover
|
| Organization name |
University of Delhi South Campus
|
| Department |
Plant Molecular Biology
|
| Lab |
Stress Biology Lab
|
| Street address |
Benito Juarez Road
|
| City |
New Delhi |
| State/province |
Delhi |
| ZIP/Postal code |
110021 |
| Country |
India |
| |
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| Platforms (1) |
| GPL8852 |
Agilent-015241 Rice Gene Expression 4x44K Microarray (Probe name version) |
|
| Samples (15)
|
| GSM814805 |
Prior oxidative stress to heat stress 1 |
| GSM814806 |
Prior oxidative stress to heat stress 2 |
| GSM814807 |
Prior oxidative stress to heat stress 3 |
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| Relations |
| BioProject |
PRJNA146999 |
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