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| Status |
Public on Mar 11, 2011 |
| Title |
Transcriptional profiling of rice salt sensitive 1 (rss1) mutant |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
RSS1 is required for maintenance of meristematic activity under salinity conditions in rice. We carried out transcriptome analysis using shoot basal tissues in wild type and rss1-2 grown under non-stress and salt-stress conditions.
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| Overall design |
WT (-NaCl), WT (+NaCl), rss1-2 (-NaCl), rss1-2 (+NaCl). Three biological replicates.
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| Contributor(s) |
Ogawa D, Hobo T, Toda Y, Hattori T, Takeda S |
| Citation(s) |
21505434 |
| Submission date |
Mar 10, 2011 |
| Last update date |
Dec 06, 2012 |
| Contact name |
Daisuke Ogawa |
| Organization name |
Nagoya University
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| Department |
Bioscience and Biotechnology Center
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| Lab |
Plant Cell Function
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| Street address |
Furou-Chou, Chikusa
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| City |
Nagoya |
| ZIP/Postal code |
464-8601 |
| Country |
Japan |
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| Platforms (1) |
| GPL6864 |
Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) |
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| Samples (12)
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| GSM688724 |
rss1-2,+NaCl_1 / WT,-NaCl_1 |
| GSM688725 |
WT,-NaCl_2 / WT,-NaCl_2 |
| GSM688726 |
WT,+NaCl_2 / WT,-NaCl_2 |
| GSM688727 |
rss1-2,-NaCl_2 / WT,-NaCl_2 |
| GSM688728 |
rss1-2,+NaCl_2 / WT,-NaCl_2 |
| GSM688729 |
WT,-NaCl_3 / WT,-NaCl_3 |
| GSM688730 |
WT,+NaCl_3 / WT,-NaCl_3 |
| GSM688731 |
rss1-2,-NaCl_3 / WT,-NaCl_3 |
| GSM688732 |
rss1-2,+NaCl_3 / WT,-NaCl_3 |
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| Relations |
| BioProject |
PRJNA137995 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE27884_RAW.tar |
171.9 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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