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Series GSE25828 Query DataSets for GSE25828
Status Public on Sep 01, 2011
Title Pten deficiency cooperates with KrasG12D to activate NFkB pathway promoting the development of malignant pancreatic ductal adenocarcinoma
Organism Mus musculus
Experiment type Expression profiling by array
Summary Almost all human pancreatic ductal adenocarcinomas (PDACs) are driven by oncogenic Kras and the progression of the disease is characterized by the serial appearance of certain genetic lesions. Mouse models have convincingly shown that Kras mutation induces classical PanIN lesions that can progress to PDAC in the appropriate tumor suppressor background. However, the cooperative mechanism between mutant Kras-dependent signaling surrogates and other oncogenic pathways remains to be fully elucidated in order to devise better therapeutic strategy. Mounting evidence PTEN/PI3K perturbation on PDAC tumorigenesis, we observed frequent PTEN inactivation at both genomic and histopathological levels in primary human PDAC samples. The importance of PTEN/PI3K pathway during the development of PDAC was further supported by genetic studies demonstrating that Pten deficiency in cooperation with Kras activation accelerated the formation of invasive PDAC. Mechanistically, combined Kras mutation and Pten inactivation leads to NFkB activation and subsequent induction of cytokine pathways, accompanied with strong stromal activation and immune cell infiltration. Therefore, PTEN/PI3K pathway dictates the activity of NFkB network and serves as a major surrogate during Kras-mediated pancreatic tumorigenesis.
 
Overall design Primary pancreatic ductal epithelial cell cultures were established from 6 week old Pdx1-Cre;LSL-KrasG12D L/+ (n=3) or Pdx1-Cre;LSL-KrasG12D L/+;Pten L/+ (n=5) mice. Total RNA was collected from early passage cells.
 
Citation(s) 21984975
Submission date Dec 02, 2010
Last update date Feb 11, 2019
Contact name Haoqiang Ying
E-mail(s) haoqiang_ying@dfci.harvard.edu
Phone 617-582-7978
Fax 617-632-6069
Organization name Dana-Farber Cancer Institute
Department Medical Oncology
Lab Ronald DePinho
Street address 44 Binney St.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (8)
GSM634501 2826
GSM634502 2880
GSM634503 2975
Relations
BioProject PRJNA135737

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Supplementary file Size Download File type/resource
GSE25828_RAW.tar 30.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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