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Series GSE244721 Query DataSets for GSE244721
Status Public on May 14, 2024
Title Mechanisms to prepare human polar trophectoderm for blastocyst implantation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The human blastocyst is composed of outer trophectoderm and an inner cell mass, which segregates into epiblast and hypoblast. scRNA sequencing of human blastocyst cells was performed to identify subpopulations following immunosurgery to remove outer cells.
 
Overall design Donated human embryos from IVF clinics were subjected to immunosurgery and surviving cells were analysed by single cell sequencing
 
Contributor(s) Corujo-Simon E, Bates LE, Clark S
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Submission date Oct 05, 2023
Last update date May 14, 2024
Contact name Lawrence E Bates
E-mail(s) lbates@ed.ac.uk
Organization name University of Edinburgh
Department Human Genetics Unit
Lab Nichols Lab
Street address Crewe Road
City Edinburgh
ZIP/Postal code EH4 2XU
Country United Kingdom
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (268)
GSM7824762 embryo1_cell1
GSM7824763 embryo1_cell2
GSM7824764 embryo1_cell3
Relations
BioProject PRJNA1024446

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE244721_counts_revised.csv.gz 2.9 Mb (ftp)(http) CSV
GSE244721_metadata_03102023.csv.gz 6.2 Kb (ftp)(http) CSV
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Raw data are available in SRA

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