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Series GSE242994 Query DataSets for GSE242994
Status Public on Jan 26, 2024
Title Transcriptomic and epigenetic dissection of spinal ependymoma (SP-EPN) identifies clinically relevant subtypes enriched for tumors with and without NF2 mutations
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by genome tiling array
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38265489
Submission date Sep 12, 2023
Last update date Feb 06, 2024
Contact name Karoline Hack
E-mail(s) hack@kinderkrebs-forschung.de
Organization name University Medical Center Hamburg-Eppendorf
Department Children's Cancer Center Hamburg
Lab Schüller
Street address Martinistraße 52
City Hamburg
ZIP/Postal code 20251
Country Germany
 
Platforms (3)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL21145 Infinium MethylationEPIC
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (294)
GSM7776597 SP-EPN 1
GSM7776598 SP-EPN 2
GSM7776599 SP-EPN 3
This SuperSeries is composed of the following SubSeries:
GSE242991 Transcriptomic and epigenetic dissection of spinal ependymoma (SP-EPN) identifies clinically relevant subtypes enriched for tumors with and without NF2 mutations [Methylation]
GSE242992 Transcriptomic and epigenetic dissection of spinal ependymomas (SP-EPN) identifies clinically relevant subtypes enriched for tumors with and without NF2 mutation [RNA-seq]
GSE242993 Transcriptomic and epigenetic dissection of spinal ependymomas (SP-EPN) identifies clinically relevant subtypes enriched for tumors with and without NF2 mutation [WES]
Relations
BioProject PRJNA1015696

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242994_RAW.tar 2.8 Gb (http)(custom) TAR (of IDAT, TSV)
GSE242994_SP-EPN_annotation.xlsx 30.6 Kb (ftp)(http) XLSX
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