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Series GSE240656 Query DataSets for GSE240656
Status Public on Apr 17, 2024
Title Multi-center Korean cohort study based on RNA-sequencing data targeting COPD patients
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To determine gene expression changes that contribute to the development of COPD among smokers using high-throughput RNA sequencing in the peripheral blood of COPD patients. Total RNA sequencing was investigated by prospectively collecting lung function test results and whole blood samples from smokers who visited the outpatient department of respiratory medicine at three hospitals since 2020. This study confirmed gene expression differences in non-coding RNA in COPD patients according to the degree of airflow limitation through RNA-Seq transcriptome analysis. These results may provide valuable predictive resources for future COPD research.
 
Overall design A transcriptomic epidemiologic study was conducted on a total of 294 patients with mild to severe COPD at three hospitals located in South Korea.
 
Contributor(s) Park J, Seo M
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Submission date Aug 11, 2023
Last update date Apr 18, 2024
Contact name Sinwoo Park
E-mail(s) zwish@korea.ac.kr
Organization name Korea Universiy
Street address Sejongro
City Sejong
ZIP/Postal code 61139
Country South Korea
 
Platforms (2)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL30209 MGISEQ-2000RS (Homo sapiens)
Samples (294)
GSM7706848 11757313
GSM7706849 11757351
GSM7706850 11757452
Relations
BioProject PRJNA1004581

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240656_RAW.tar 1.4 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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