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| Status |
Public on Mar 31, 2024 |
| Title |
DNA methylation profiles in gastric mucosa samples with low, intermediate and high cancer risk |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
DNA methylation profiles were compared between gastric mucosae samples without Helicobacter pylori (HP) infection (low risk : G1), those with HP eradication without gastric cancer (intermediate risk : G2), and those with HP eradication with gastric cancer (high risk : G3).
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| Overall design |
Genome-wide DNA methylation analysis was conducted by an Infinium HumanMethylation450K BeadChip array. This study only has the low risk samples (G1).
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| Contributor(s) |
Yamada H, Irie T, Ushijima T |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Mar 07, 2023 |
| Last update date |
Apr 01, 2024 |
| Contact name |
Harumi Yamada |
| E-mail(s) |
h5a1r7u7@gmail.com
|
| Phone |
+81-03-5498-5896
|
| Organization name |
Hoshi University
|
| Department |
Department of Epigenomics
|
| Street address |
2-4-41 Ebara Shinagawa-ku
|
| City |
Tokyo |
| ZIP/Postal code |
1428501 |
| Country |
Japan |
| |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (8)
|
| GSM7084171 |
DNA mehtylation of human stomach without HP innfection (G1_Y1) |
| GSM7084172 |
DNA mehtylation of human stomach without HP innfection (G1_Y2) |
| GSM7084173 |
DNA mehtylation of human stomach without HP innfection (G1_Y3) |
| GSM7084174 |
DNA mehtylation of human stomach without HP innfection (G1_Y4) |
| GSM7084175 |
DNA mehtylation of human stomach without HP innfection (G1_O1) |
| GSM7084176 |
DNA mehtylation of human stomach without HP innfection (G1_O2) |
| GSM7084177 |
DNA mehtylation of human stomach without HP innfection (G1_O3) |
| GSM7084178 |
DNA mehtylation of human stomach without HP innfection (G1_O4) |
|
| Relations |
| BioProject |
PRJNA941836 |
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