|
| Status |
Public on Jun 19, 2012 |
| Title |
Murine small intestinal crypt cell line IEC-6: control vs. TGF-beta stimulated |
| Platform organisms |
Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human betaherpesvirus 5; Murid betaherpesvirus 1; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Betapolyomavirus hominis; Betapolyomavirus macacae |
| Sample organism |
Rattus norvegicus |
| Experiment type |
Non-coding RNA profiling by array
|
| Summary |
microRNA profiling of rat small intestinal crypt cell IEC-6. Comparing control untreated with cells treated with transforming growth factor-beta (TGF-beta). TGF-beta stimulated cell differentiation, as observed in the stimulation of intestinal epithelial cell markers (alkaline phophotase, villin, aminopeptidase N, etc.).
|
| |
|
| Overall design |
Two condition experiment. Control vs TGF-beta treatment. Biological replicates: 3 control, 3 treated. Independently grown and harvested. One replicate per array
|
| |
|
| Contributor(s) |
Liao Y, Lönnerdal B |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Mar 19, 2010 |
| Last update date |
May 10, 2016 |
| Contact name |
Bo Lonnerdal |
| E-mail(s) |
bllonnerdal@ucdavis.edu
|
| Organization name |
University of California, Davis
|
| Department |
Nutrition
|
| Lab |
3329 Meyer Hall
|
| Street address |
1 Shields Ave.
|
| City |
Davis |
| State/province |
CA |
| ZIP/Postal code |
95616 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL7723 |
miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno |
|
| Samples (3) |
| GSM524622 |
TGF-beta stimulated vs. control IEC-6 cell replicate 1 |
| GSM524623 |
TGF-beta stimulated vs. control IEC-6 cell replicate 2 |
| GSM524624 |
TGF-beta stimulated vs. control IEC-6 cell replicate 3 |
|
| Relations |
| BioProject |
PRJNA124489 |
