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Series GSE196148 Query DataSets for GSE196148
Status Public on Oct 26, 2023
Title DNA methylation of fibroblasts from one HGPS patient
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary DNAm profiling of fibroblasts from one HGPS patient (6 years; 3 replicates assessed) and two healthy controls (12 and 15 years, each assessed in 2 replicates)
 
Overall design 1 µg of DNA was bisulfite-converted using the EZ DNA Methylation kit (Zymo Research) and analysed using the HumanMethylationEPIC BeadChip (Illumina) following manufacturer's instructions
 
Contributor(s) Lattanzi G, Bacalini MG, Garagnani P
Citation(s) 37688320
Submission date Feb 04, 2022
Last update date Oct 27, 2023
Contact name Maria Giulia Bacalini
E-mail(s) mugiu17@hotmail.com
Phone 00390512094748
Organization name IRCCS Istituto delle Scienze Neurologiche di Bologna
Department Brain Aging Laboratory
Street address Via Altura 3
City Bologna
ZIP/Postal code 40139
Country Italy
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (7)
GSM5861276 genomic DNA from fibroblasts from healthy control 1 (replicate 1)
GSM5861277 genomic DNA from fibroblasts from healthy control 1 (replicate 2)
GSM5861278 genomic DNA from fibroblasts from healthy control 2 (replicate 1)
Relations
BioProject PRJNA803475

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196148_HGPS_unmeth_meth_input_GEO.txt.gz 17.8 Mb (ftp)(http) TXT
GSE196148_RAW.tar 240.0 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table

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