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Series GSE195640 Query DataSets for GSE195640
Status Public on Mar 31, 2022
Title DNA methylation-based age acceleration observed in IDH wild-type glioblastoma is associated with better outcome - including in elderly patients
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary GBM samples (FFPE tissue) obtained from patients treated in clinical trials according to pre-specified clinical criteria (EORTC 26981/NCIC CE.3 pooled with the Lausanne Pilot trial, n=156).
 
Overall design Bisulphite converted genomic DNA from the 156 samples were hybridised to the Illumina Infinium 450 Human Methylation Beadchip
 
Contributor(s) Bady P, Marosi C, Weller M, Grønberg BH, Schultz H, Taphoorn MJ, Gijtenbeek JM, van den Bent MJ, von Deimling A, Stupp R, Malmström A, Hegi ME
Citation(s) 35331339
Submission date Jan 28, 2022
Last update date Apr 01, 2022
Contact name Pierre Bady
E-mail(s) pierre.bady@unil.ch
Phone 0041 21 692 40 95
Organization name CHUV / BCF / SIB
Department Swiss Institute of Bioinformatics
Lab Bioinformatics Core Facility
Street address Quartier UNIL-Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (156)
GSM5842117 genomic_DNA_from_Surgical_resection_GBM-2
GSM5842118 genomic_DNA_from_Surgical_resection_GBM-4
GSM5842119 genomic_DNA_from_Surgical_resection_GBM-7
Relations
BioProject PRJNA801611

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE195640_Matrix_Processed_BADY_GBMeortc26981pilot.csv.gz 843.0 Mb (ftp)(http) CSV
GSE195640_Matrix_signal_Intensities_BADY_GBMeortc26981pilot.csv.gz 1.4 Gb (ftp)(http) CSV
GSE195640_RAW.tar 1.4 Gb (http)(custom) TAR (of IDAT)
Processed data are available on Series record
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