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Series GSE190858 Query DataSets for GSE190858
Status Public on Mar 01, 2022
Title JUN ChIP-seq in injured nerve
Organism Rattus norvegicus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of c-JUN in injured rat peripheral nerve
 
Overall design JUN ChIP samples were prepared from rat sciatic nerve at 8 day post-transection using both the distal stump of the injured nerve .
 
Contributor(s) Ma KH, Svaren J, Ramesh R
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Submission date Dec 14, 2021
Last update date Mar 01, 2022
Contact name John Svaren
E-mail(s) jpsvaren@wisc.edu
Organization name University of Wisconsin
Department Comparative Biosciences
Lab Waisman Center
Street address 1500 Highland Ave.
City Madison
State/province WI
ZIP/Postal code 53705
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (4)
GSM5733041 Injury Sciatic nerve JUN ChIP-seq 1
GSM5733042 Injury Sciatic nerve JUN ChIP-seq 2
GSM5733043 Injured nerve input1
Relations
BioProject PRJNA788755
SRA SRP351259

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190858_JUN_8dpi.bedgraph.gz 171.1 Mb (ftp)(http) BEDGRAPH
GSE190858_JUN_8dpi_Peaks.txt.gz 136.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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