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Series GSE188408 Query DataSets for GSE188408
Status Public on Nov 08, 2022
Title Continuous gene expression profile of leaf of rice grown under field conditions
Platform organism Oryza sativa
Sample organisms Oryza sativa Indica Group; Oryza sativa Japonica Group
Experiment type Expression profiling by array
Summary A continuous gene expression profiling of leaves at regular interval was performed to understand the changes of transcriptional program and physiological state of the rice plant under two different field conditions.
 
Overall design For continuous gene expression profile of leaf, the uppermost fully-expanded leaf in the main stem was sampled at 10:00-12:00 AM at regular intervals of about 7 days encompassing 10 different growth stages during a normal rice growing season.
 
Contributor(s) Takehisa H, Sato Y
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Submission date Nov 08, 2021
Last update date Nov 10, 2022
Contact name Hinako Takehisa
E-mail(s) thinako@affrc.go.jp
Organization name National Institute of Agrobiological Sciences (NIAS)
Street address 2-1-2 Kannondai
City Tsukuba
ZIP/Postal code 305-8602
Country Japan
 
Platforms (1)
GPL6864 Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version)
Samples (129)
GSM5680813 LeafBlade_Nipponbare_21DAT_LP_2012
GSM5680814 LeafBlade_Nipponbare_28DAT_LP_2012
GSM5680815 LeafBlade_Nipponbare_35DAT_LP_2012
Relations
BioProject PRJNA778744

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188408_RAW.tar 984.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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