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Series GSE18678 Query DataSets for GSE18678
Status Public on Oct 21, 2009
Title Expression data from ependymal layer of wild type and FoxJ1 null postnatal male mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary FoxJ1 dependent gene expression is required for establishment of ependymal cells in the postnatal brain. This data set compares gene expression profiles of wildtype and FoxJ1 null microdissected dissected tissues at multiple postnatal time points.
We used microarrays to detail the FoxJ1-dependent programme of gene expression underlying ependymal cell differentiation in the mouse brain.
 
Overall design Using FoxJ1-EGFP brains, EGFP(+) domains were microdissected using laser capture microscopy from P1, P7 and P14 wildtype and FoxJ1 null brains.
 
Contributor(s) Ghashghaei HT
Citation(s) 19906869
Submission date Oct 21, 2009
Last update date Mar 04, 2019
Contact name Troy Ghashghaei
E-mail(s) troy_ghashghaei@ncsu.edu
Phone 919-513-6174
Fax 919-513-6465
URL http://cvm.ncsu.edu/mbs/personnel/ghashghaei_troy.html
Organization name North Carolina State University
Department Molecular Biomedical Sciences
Lab Ghashghaei
Street address 4700 Hillsborough Street
City Raleigh
State/province NC
ZIP/Postal code 27606
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM463956 P1 KO FoxJ1EGFP+
GSM463957 P1 WT FoxJ1EGFP+
GSM463958 P7 KO FoxJ1EGFP+
Relations
BioProject PRJNA121553

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18678_RAW.tar 27.8 Mb (http)(custom) TAR (of CEL)
GSE18678_significant_genes_list.txt.gz 2.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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