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Series GSE183648 Query DataSets for GSE183648
Status Public on Sep 08, 2022
Title Loss of p53 suppresses replication stress-induced DNA damage in ATRX-deficient neuroblastoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To elucidate ATRX-dependent transcriptional alterations and their functional consequences, we performed a microarray analysis of Ctrl and ATRX KO NGP cells.
 
Overall design Total RNA was extracted from Ctrl and two ATRX KO NGP clones, and a microarray analysis was performed using the Agilent-072363 SurePrint G3 Human GEv3 8 × 60 K Microarray G4851C (Agilent Technologies, Santa Clara, CA, USA).
 
Contributor(s) Kamijo T, Akter J, Ohira M, Sugino RP, Takenobu H
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Submission date Sep 08, 2021
Last update date Sep 10, 2022
Contact name Hisanori Takenobu
Phone +81-48-722-1111
Organization name Saitama Cancer Center
Department Research Institute for Clinical Oncology
Street address 818, Komuro, Ina-machi
City Kitaadachi-gun
State/province Saitama
ZIP/Postal code 362-0806
Country Japan
 
Platforms (1)
GPL21185 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
Samples (12)
GSM5566866 NGP_Ctrl_rep01
GSM5566867 NGP_Ctrl_rep02
GSM5566868 NGP_Ctrl_rep03
Relations
BioProject PRJNA761566

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE183648_RAW.tar 36.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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