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Series GSE172385 Query DataSets for GSE172385
Status Public on Jul 19, 2021
Title Project_Summary_Rat_primary_cortical_neurons_asyn_3K_RNA_Seq
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Identify early and late stage expression/pathway changes induced during aSyn 3K mediated cellular toxicity (AAV9 with human a-syn 3K model)
 
Overall design Transcriptional profiling of rat cortical neuron cultures overexpressing human aSyn 3K or empty vector at 6, 12, and 19 days post AAV
 
Contributor(s) Groot J, Carlile T, Hrdlicka L, Nicholatos J
Citation(s) 34301719
Submission date Apr 20, 2021
Last update date Sep 08, 2021
Contact name Justin Nicholatos
E-mail(s) jwnichol1@gmail.com
Organization name Biogen
Department Neurodegeneration
Street address 225 Binney St
City Cambridge
State/province Massachusetts
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (30)
GSM5253900 EV_PBS_D6_1
GSM5253901 EV_PBS_D6_2
GSM5253902 EV_PBS_D6_3
Relations
BioProject PRJNA723193
SRA SRP315505

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172385_Norm_Counts_RNAseq.xlsx 9.2 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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