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Series GSE150567 Query DataSets for GSE150567
Status Public on Dec 31, 2020
Title Lung response to crystalline nanocellulose exposure in rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Crystalline nanocellulose (CNC) is an emerging nanomaterial with multiple commercial and industrial applications. Occupational exposure to CNC during the production and/or use of products containing the nanomaterial potentially resulting in adverse health effects among workers is possible. Therefore, there is an immediate need to determine the toxicity potential of CNC. Rats were exposed to either air or CNC (20 mg/m^3, 6 hours/day, 5 days/week, 14 days) and lung toxicity was determined one day following termination of the exposures. Compared to the control rats, the CNC exposed rats exhibited moderate changes in lung histology. Lactate dehydrogenase activity and the number of phagocytes present in the bronchoalveolar lavage were higher in the CNC exposed rats, compared with the controls. Global gene expression profiling identified 531 genes whose expressions were significantly different (fold change >1.5 and FDR p <0.05) in the lungs of the CNC exposed rats, compared with the controls. In summary, the data demonstrated the induction of pulmonary toxicity and global gene expression changes in the lungs of the rats in response to inhalation exposure to CNC.
 
Overall design Rats (n=6) were exposed by whole body inhalation to air or crystalline nanocellulose (20 mg/m3, 6 hours/day for 5 days/week for a total of 14 days of exposure). One day after the final exposure, lung tissue was collected, and Next Generation Sequencing was performed on the lungs of 6 rats per treatment group (air/crystalline nanocellulose).
 
Contributor(s) Sager TM, Umbright CM, Joseph P
Citation(s) 33602020
Submission date May 14, 2020
Last update date Apr 01, 2021
Contact name Christina M Umbright
Organization name DHHS/PHS/CDC/NIOSH
Department HELD
Lab L-4324
Street address 1095 Willowdale Road
City Morgantown
State/province WV
ZIP/Postal code 26505
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (12)
GSM4552461 CNC_20_31_Lu
GSM4552462 CNC_20_32_Lu
GSM4552463 CNC_20_33_Lu
Relations
BioProject PRJNA632831
SRA SRP261603

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Supplementary file Size Download File type/resource
GSE150567_NCB_hisat2_Rnor6_counts.csv.gz 424.0 Kb (ftp)(http) CSV
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Processed data are available on Series record

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