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Series GSE149364 Query DataSets for GSE149364
Status Public on Nov 30, 2020
Title RNA sequencing of rodent myocardial tissue when subjected to a myocardial infarction (MI) or an MI and a surgical device (TRD) for 12 weeks.
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The goal of this study is to compare mRNA related cellular pathways associated with a myocardial infarction (MI) with a surgical device to prevent cardiac remodeling compared to an MI only
Conclusions: RNA sequencing revealed an activation of multiple cellular pathways with the device group.
 
Overall design Methods: RNA was extracted from myocardial tissue at 12 weeks after surgery in both the MI and TRD group (n=6/group) and was subjected to unbiased RNA sequencing.
 
Contributor(s) Corporan D, Padala M, Onohara D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 26, 2020
Last update date Nov 30, 2020
Contact name Muralidhar Padala
E-mail(s) spadala@emory.edu
Organization name Emory University
Street address 380B Northyards Blvd NW
City Atlanta
State/province GA
ZIP/Postal code 30313
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (23)
GSM4498615 S12_1
GSM4498616 S12_2
GSM4498617 S12_3
Relations
BioProject PRJNA628505
SRA SRP258579

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149364_MI+TRD_6wk_vs_MI_6wk-gene_list.csv.gz 596.7 Kb (ftp)(http) CSV
GSE149364_MI_TRD_12wk_vs_MI_12wk-gene_list.csv.gz 633.4 Kb (ftp)(http) CSV
GSE149364_Partek_MI_12wk_vs_TRD_12wk_Normalized_counts.txt.gz 583.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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