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Series GSE133076 Query DataSets for GSE133076
Status Public on Jun 21, 2019
Title Progression of liver tumor was promoted by tris(1,3-dichloro-2-propyl)phosphate through the induction of inflammatory responses in krasV12 transgenic zebrafish
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary In this study, krasV12 genetically modified zebrafish, Tg(fabp10:rtTA2s-M2; TRE2:EGFP-krasG12V), an inducible liver tumor model, was used to evaluate the promotion potential of TDCIPP for liver tumor. Briefly, krasV12 transgenic females were exposed to 0.3 mg/L TDCIPP, 20 mg/L doxycycline (DOX) and a binary mixture of 0.3 mg/L TDCIPP with 20 mg/L DOX, and liver size, histopathology, and transcriptional profiles of liver were tested. Treatment with TDCIPP increased the liver size and caused more aggressive hepatocellular carcinoma (HCC). Furthermore, compared with the exposure to DOX, TDCIPP in the presence of DOX up-regulated the expression of genes relevant with salmonella infection and the toll-like receptor signaling pathway, implying an occurrence of inflammatory reaction, which was sustained by the increase in the amount of infiltrated neutrophils in the liver of Tg(lyz:DsRed2) transgenic zebrafish larvae. Collectively, our results suggested that TDCIPP could promote the liver tumor progression by induction of hepatic inflammatory responses.
 
Overall design Liver mRNA prolifie of 3 months old kras zebrafish which were treated with DMSO, TDCIPP, DOX, DOX with TDCIPP were generated by deep sequencing, in triplicate.
 
Contributor(s) Chen S, Liu C
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Submission date Jun 20, 2019
Last update date Jun 21, 2019
Contact name Chen Sheng
E-mail(s) cs55490964@163.com
Phone 17607175732
Organization name Novogene
Street address Wuqing
City Tianjing
ZIP/Postal code 301700
Country China
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (12)
GSM3899426 Liver, FC1
GSM3899427 Liver, FC2
GSM3899428 Liver, FC3
Relations
BioProject PRJNA549880
SRA SRP201987

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Supplementary file Size Download File type/resource
GSE133076_Processed_data.txt.gz 12.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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