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Series GSE107259 Query DataSets for GSE107259
Status Public on Apr 13, 2018
Title Environment-dependent striatal gene expression in the BACHD rat model for Huntington disease
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary We examined effects of early life stress (ELS) and environmental enrichment (EE) during development on BACHD rat striatal gene expression using RNA sequencing
 
Overall design We used a 2×3 factorial design with two genotypes (wildtype, WT; transgene, TG) and three environmental conditions (standard environment, SE; enriched environment, EE; early life stress, ELS) to assess effects of environmental enrichment and early life stress on striatal gene expression of 2-month-old WT and BACHD rats
 
Contributor(s) Schulze-Hentrich JM, Hentrich T
Citation(s) 29643462
Submission date Nov 22, 2017
Last update date May 15, 2019
Contact name Julia Maria Schulze-Hentrich
E-mail(s) juliamschulze@gmail.com
Organization name Saarland University
Department Genetics and Epigenetics
Street address Campus, Building A2.4
City Saarbrücken
ZIP/Postal code 66123
Country Germany
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (36)
GSM2863343 I16R031a01
GSM2863344 I16R031a02
GSM2863345 I16R031a03
Relations
BioProject PRJNA419484
SRA SRP125460

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107259_rawcounts.csv.gz 1.1 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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