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Platform GPL6985 Query DataSets for GPL6985
Status Public on Jun 23, 2008
Title Illumina HumanCNV370-QuadV3 DNA Analysis BeadChip (HumanCNV370-QuadV3_C)
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
 
Description features more than 380,000 markers, including more than 320,000 uniformly distributed tag SNPs
 
Web link http://www.illumina.com/pages.ilmn?ID=273
Submission date Jun 20, 2008
Last update date Jan 30, 2015
Organization Illumina Inc.
E-mail(s) expression@illumina.com, techsupport@illumina.com
Phone 1 800 809 4566
URL http://www.illumina.com
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Samples (721) GSM427358, GSM427359, GSM427360, GSM427361, GSM427362, GSM427363 
Series (24)
GSE17091 Illumina HapMap CEU ( HumanCNV370-QuadV3 )
GSE17092 Illumina HapMap CHB and JPT (HumanCNV370-QuadV3)
GSE17093 Illumina HapMap YRI (HumanCNV370-QuadV3)

Data table header descriptions
ID IlmnID
Name
SNP_ID ncbi SNP accession
PROBE #PROBE = PROBE Name
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo
Ploidy
Species
Source
SourceVersion
SourceStrand
SEQUENCE SourceSeq
TopGenomicSeq
BeadSetID
Intensity_Only
Exp_Clusters
CNV_Probe

Data table
ID Name SNP_ID PROBE IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo Ploidy Species Source SourceVersion SourceStrand SEQUENCE TopGenomicSeq BeadSetID Intensity_Only Exp_Clusters CNV_Probe
cnvi0000001-126_T_R_1514230395 cnvi0000001 cnvi0000001 TOP [A/G] 124680304 AAAAGTATAAACAGAAGTTTATAGTTTATAAAAAGTATAAACAGAAGTTT 36 5 164388439 diploid Homo sapiens Illumina assay db 126 BOT TTTATACTTTTTATAAACTATAAACTTCTGTTTATACTTTTTATAAACTA[T/C]AAACTTCTGTTTATACTTTTTATAAACTATAAACTTCTGTTTATACTTTTTATAAACTAT ATAGTTTATAAAAAGTATAAACAGAAGTTTATAGTTTATAAAAAGTATAAACAGAAGTTT[A/G]TAGTTTATAAAAAGTATAAACAGAAGTTTATAGTTTATAAAAAGTATAAA 8 1 1 1
cnvi0000002-126_T_R_1514230396 cnvi0000002 cnvi0000002 TOP [A/G] 124681302 CTCAGGTACCTGATTGTATGCCAATTCTCTTTTACCTTTTTCTTATTACT 36 5 165771245 diploid Homo sapiens Illumina assay db 126 BOT CAGTAATTTAACTGCAGTAATTTATTTTTAAAATCGTAACATTTGAATTG[T/C]AGTAATAAGAAAAAGGTAAAAGAGAATTGGCATACAATCAGGTACCTGAGAAAGAAGAAA TTTCTTCTTTCTCAGGTACCTGATTGTATGCCAATTCTCTTTTACCTTTTTCTTATTACT[A/G]CAATTCAAATGTTACGATTTTAAAAATAAATTACTGCAGTTAAATTACTG 8 1 1 1
cnvi0000003-126_T_F_1514230397 cnvi0000003 cnvi0000003 TOP [A/G] 124684354 CCCACTTCTGTGGTCCAGAGAAAAGTGGCCTGGAGAAACTGCTCTCATCA 36 5 165772271 diploid Homo sapiens Illumina assay db 126 TOP CTTATATTTCCCCACTTCTGTGGTCCAGAGAAAAGTGGCCTGGAGAAACTGCTCTCATCA[A/G]AATACAGTTACTAAACCTGGAGACCTCTCCTGTCGTATTTGCATTTGACAC CTTATATTTCCCCACTTCTGTGGTCCAGAGAAAAGTGGCCTGGAGAAACTGCTCTCATCA[A/G]AATACAGTTACTAAACCTGGAGACCTCTCCTGTCGTATTTGCATTTGACAC 8 1 1 1
cnvi0000004-126_T_F_1514265395 cnvi0000004 cnvi0000004 TOP [A/G] 124686389 GTGGAACTGATGGGGATTGGGTGATGTTCCAGATGGAGGCGAAATAAGAG 36 5 166325838 diploid Homo sapiens Illumina assay db 126 TOP TCTTTCTTGTGGAACTGATGGGGATTGGGTGATGTTCCAGATGGAGGCGAAATAAGAG[A/G]GGAAAACCATGGACAAAGGAAATTATAGTTTATGAGAATCATTTAACTAGGG TCTTTCTTGTGGAACTGATGGGGATTGGGTGATGTTCCAGATGGAGGCGAAATAAGAG[A/G]GGAAAACCATGGACAAAGGAAATTATAGTTTATGAGAATCATTTAACTAGGG 8 1 1 1
cnvi0000005-126_T_R_1514265396 cnvi0000005 cnvi0000005 TOP [A/G] 124687348 ATCCATATGTATATATCCCATATATATATCCATATGTATATATCCCATAT 36 5 166710354 diploid Homo sapiens Illumina assay db 126 BOT atatatacatatggatatatatatatgggatatatacatatggatatata[T/C]ATATGGGATATATACATATGGATATATATATGGGATATATACATATGGatatatatatgg ccatatatatatCCATATGTATATATCCCATATATATATCCATATGTATATATCCCATAT[A/G]tatatatccatatgtatatatcccatatatatatatccatatgtatatat 8 1 1 1
cnvi0000006-126_B_R_1514265397 cnvi0000006 cnvi0000006 BOT [T/C] 124687377 TATATCCATATGTATATATCCCATATATATATCCATATGTATACATCCCA 36 5 166710467 diploid Homo sapiens Illumina assay db 126 TOP ggatatatacatatggatatatatatgggatgtatacatatggatatatatat[A/G]tgggatgtatacatatggatatatatatgggatatatacatatggatatatata ggatatatacatatggatatatatatgggatgtatacatatggatatatatat[A/G]tgggatgtatacatatggatatatatatgggatatatacatatggatatatata 8 1 1 1
cnvi0000008-126_T_F_1514230398 cnvi0000008 cnvi0000008 TOP [A/G] 124689383 GGACAGTCGCGGCGCTGACGCCCGCGGGCACCAGCTGCAGATATGAAGCA 36 5 167218291 diploid Homo sapiens Illumina assay db 126 TOP GGAGCCGGGACAGTCGCGGCGCTGACGCCCGCGGGCACCAGCTGCAGATATGAAGCA[A/G]AGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCGGGAGGATGG GGAGCCGGGACAGTCGCGGCGCTGACGCCCGCGGGCACCAGCTGCAGATATGAAGCA[A/G]AGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCGGGAGGATGG 8 1 1 1
cnvi0000009-126_B_R_1514230399 cnvi0000009 cnvi0000009 BOT [T/C] 124689391 TGCGATGGGGAAGCAGGTAGAATGTGGTAGAAAGAGCACTGGGCTAGGAG 36 5 168101829 diploid Homo sapiens Illumina assay db 126 TOP CTGCTGAGTAGCCCCAAGGCACAGGCAGAACCAAGGCTGGGACTCACCTCTGG[A/G]CTCCTAGCCCAGTGCTCTTTCTACCACATTCTACCTGCTTCCCCATCGCAGGCTAGC CTGCTGAGTAGCCCCAAGGCACAGGCAGAACCAAGGCTGGGACTCACCTCTGG[A/G]CTCCTAGCCCAGTGCTCTTTCTACCACATTCTACCTGCTTCCCCATCGCAGGCTAGC 8 1 1 1
cnvi0000010-126_T_F_1514230400 cnvi0000010 cnvi0000010 TOP [A/G] 124690385 GGTTTCTACTCCAGATCTCATGCTCTTGCAAACTGCACTTTTTGCCGGTT 36 5 169426557 diploid Homo sapiens Illumina assay db 126 TOP ACTTTAGGTTTCTACTCCAGATCTCATGCTCTTGCAAACTGCACTTTTTGCCGGTT[A/G]GCTTTTGATGGCACTCTGTTTATATCGCCTTCTAAGAGGTGTTGGACAGGTGTT ACTTTAGGTTTCTACTCCAGATCTCATGCTCTTGCAAACTGCACTTTTTGCCGGTT[A/G]GCTTTTGATGGCACTCTGTTTATATCGCCTTCTAAGAGGTGTTGGACAGGTGTT 8 1 1 1
cnvi0000011-126_T_F_1514230401 cnvi0000011 cnvi0000011 TOP [A/G] 124715405 TTCTTTATAATACATTCCGTGGGAGGAGAATCAGGATCTGGGCTTGGCAC 36 5 170256922 diploid Homo sapiens Illumina assay db 126 TOP TTTCTTTATAATACATTCCGTGGGAGGAGAATCAGGATCTGGGCTTGGCAC[A/G]T TTTCTTTATAATACATTCCGTGGGAGGAGAATCAGGATCTGGGCTTGGCAC[A/G]T 8 1 1 1
cnvi0000012-126_B_F_1514265399 cnvi0000012 cnvi0000012 BOT [T/C] 124720425 TGTAGATTTATGACCTCCATTTATCCTTCCGGTGAGGAGGATGTCATAAC 36 5 170263206 diploid Homo sapiens Illumina assay db 126 BOT CCCAGAAGTATGTAGATTTATGACCTCCATTTATCCTTCCGGTGAGGAGGATGTCATAAC[T/C]TGACCTCATAATGGCATCTTGGCAATGAAGGAACTTAATGAGC GCTCATTAAGTTCCTTCATTGCCAAGATGCCATTATGAGGTCA[A/G]GTTATGACATCCTCCTCACCGGAAGGATAAATGGAGGTCATAAATCTACATACTTCTGGG 8 1 1 1
cnvi0000013-126_T_R_1514265400 cnvi0000013 cnvi0000013 TOP [A/G] 125601317 CAGGTCTAAAAAATCTTCATCTTTGCTGCTCATAGTTTCACAAGTAAGAC 36 5 170611976 diploid Homo sapiens Illumina assay db 126 BOT CAGACCCAATGCGGGTTCATGAGATTTTTCAGGGAACATTAACTAATGAAACCAGA[T/C]GTCTTACTTGTGAAACTATGAGCAGCAAAGATGAAGATTTTTTAGACCTGTCTG CAGACAGGTCTAAAAAATCTTCATCTTTGCTGCTCATAGTTTCACAAGTAAGAC[A/G]TCTGGTTTCATTAGTTAATGTTCCCTGAAAAATCTCATGAACCCGCATTGGGTCTG 8 1 1 1
cnvi0000014-126_T_F_1514265401 cnvi0000014 cnvi0000014 TOP [A/G] 125603410 CTTCTATATTAAACATGCAAAAACAACAAAAAATCCATTCATTCATTCAG 36 5 171221718 diploid Homo sapiens Illumina assay db 126 TOP ACTTCTATATTAAACATGCAAAAACAACAAAAAATCCATTCATTCATTCAG[A/G]ATTGCCTCCTCCCCTGCCCCCTCCCTTCCCCCTGGGCTTTCCTAACCAGTTTGATATTG ACTTCTATATTAAACATGCAAAAACAACAAAAAATCCATTCATTCATTCAG[A/G]ATTGCCTCCTCCCCTGCCCCCTCCCTTCCCCCTGGGCTTTCCTAACCAGTTTGATATTG 8 1 1 1
cnvi0000015-126_T_F_1514265402 cnvi0000015 cnvi0000015 TOP [A/G] 117614419 GGCTGTCCTGTGCGTTAGTTGTGGGGGCTGTCCTGTGCATTTGTTGTGGG 36 5 171435825 diploid Homo sapiens Illumina assay db 126 TOP TGTTGTGGGGGCTGTCCTGTGCGTTAGTTGTGGGGGCTGTCCTGTGCATTTGTTGTGGG[A/G]GCGTCCTGTGCATTTGTTGTGGGGGCGTCCTGTGCGTTAGTTGTGGGGGCT TGTTGTGGGGGCTGTCCTGTGCGTTAGTTGTGGGGGCTGTCCTGTGCATTTGTTGTGGG[A/G]GCGTCCTGTGCATTTGTTGTGGGGGCGTCCTGTGCGTTAGTTGTGGGGGCT 16 1 1 1
cnvi0000016-126_B_F_1514230402 cnvi0000016 cnvi0000016 BOT [T/C] 148642316 TGTTGTGGGGGCGTCCTGTGCATTTGTTGTGGGGGCGTCCTGTGCGTTAG 36 5 171436038 diploid Homo sapiens Illumina assay db 126 BOT TTTGTTGTGGGGGCGTCCTGTGCATTTGTTGTGGGGGCGTCCTGTGCGTTAG[T/C]TGTGGGGGCTGTCCTGTGC GCACAGGACAGCCCCCACA[A/G]CTAACGCACAGGACGCCCCCACAACAAATGCACAGGACGCCCCCACAACAAA 8 1 1 1
cnvi0000017-126_B_F_1514265403 cnvi0000017 cnvi0000017 BOT [T/C] 125608300 TCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCT 36 5 171656449 diploid Homo sapiens Illumina assay db 126 BOT GAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCT[T/C]CAGGAGTCTCGAATCCCACGGG CCCGTGGGATTCGAGACTCCTG[A/G]AGCCGTACGCCCGTGGGATTCGAGACTCCTGAAGCCGTACGCCCGTGGGATTCGAGACTC 8 1 1 1
cnvi0000018-126_T_F_1514265404 cnvi0000018 cnvi0000018 TOP [A/G] 125613337 TACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTC 36 5 171656460 diploid Homo sapiens Illumina assay db 126 TOP CCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTC[A/G]AATCCCACGGGCGTACGGCTTCAGGAGTCTCGAA CCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTC[A/G]AATCCCACGGGCGTACGGCTTCAGGAGTCTCGAA 8 1 1 1
cnvi0000019-126_B_F_1514230403 cnvi0000019 cnvi0000019 BOT [T/C] 128657382 CTGCTATGATGTCACCTTGGGGCTATTGTCATTCCTCTAGGATCTTTTAT 36 5 171837814 diploid Homo sapiens Illumina assay db 126 BOT CCTGCTATGATGTCACCTTGGGGCTATTGTCATTCCTCTAGGATCTTTTAT[T/C]AG CT[A/G]ATAAAAGATCCTAGAGGAATGACAATAGCCCCAAGGTGACATCATAGCAGG 16 1 1 1
cnvi0000020-126_T_F_1514230404 cnvi0000020 cnvi0000020 TOP [A/G] 125618383 GCTATGATGTCACCTTGGGGCTATTGTCATTCCTCTAGGATCTTTTATCA 36 5 171838691 diploid Homo sapiens Illumina assay db 126 TOP CCTGCTATGATGTCACCTTGGGGCTATTGTCATTCCTCTAGGATCTTTTATCA[A/G]GAGT CCTGCTATGATGTCACCTTGGGGCTATTGTCATTCCTCTAGGATCTTTTATCA[A/G]GAGT 8 1 1 1
cnvi0000021-126_T_R_1514230405 cnvi0000021 cnvi0000021 TOP [A/G] 125623380 ACTGAATCCCTAGGGATTTTTTAAAAGCCAGATCTATAGCGAGAATGAAT 36 5 172121735 diploid Homo sapiens Illumina assay db 126 BOT TTTGACTTGCATCACCTTTTATTACACAAAATAGATTTCAGCCATGTTGCA[T/C]ATTCATTCTCGCTATAGATCTGGCTTTTAAAAAATCCCTAGGGATTCAGTCTCATCGAT ATCGATGAGACTGAATCCCTAGGGATTTTTTAAAAGCCAGATCTATAGCGAGAATGAAT[A/G]TGCAACATGGCTGAAATCTATTTTGTGTAATAAAAGGTGATGCAAGTCAAA 8 1 1 1

Total number of rows: 373397

Table truncated, full table size 159775 Kbytes.




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Supplementary file Size Download File type/resource
GPL6985_HumanCNV370-Quadv3_C.csv.gz 36.3 Mb (ftp)(http) CSV

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