 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Oct 17, 2014 |
| Title |
[HT_HG-U133_Plus_PM] Affymetrix HT HG-U133+ PM Array Plate [CDF: HTHGU133PlusPM_Hs_ENTREZG_v15.1.0] |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
see manufacturer's web site
|
| |
|
| Description |
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/geo_affy.html
This platform is identical to GPL13158 but a custom cdf environment was used to extract data.
|
| |
|
| Web link |
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/15.1.0/entrezg.asp
|
| Submission date |
Oct 17, 2014 |
| Last update date |
Jan 21, 2015 |
| Contact name |
GEO admin |
| E-mail(s) |
geo@ncbi.nlm.nih.gov
|
| Organization name |
NCBI/NLM/NIH
|
| Street address |
9000 Rockville Pike
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Samples (18)
|
GSM1527610, GSM1527611, GSM1527612, GSM1527613, GSM1527614, GSM1527615
GSM1527616, GSM1527617, GSM1527618, GSM1527619, GSM1527620, GSM1527621, GSM1527622, GSM1527623, GSM1527624, GSM1527625, GSM1527626, GSM1527627
|
| Series (1) |
| GSE62477 |
MELK-T1, a small molecule inhibitor of protein kinase MELK, decreases DNA damage tolerance in highly proliferating cancer cells |
|
| Relations |
| Alternative to |
GPL13158 (official platform) |
| Data table header descriptions |
| ID |
|
| PROBENUM |
|
| SPOT_ID |
ENTREZ_GENE_ID |
| GENE SYMBOL |
|
| GENE NAME |
|
| Data table |
| ID |
PROBENUM |
SPOT_ID |
GENE SYMBOL |
GENE NAME |
| 100009676_at |
11 |
100009676 |
LOC100009676 |
uncharacterized LOC100009676 |
| 10000_at |
47 |
10000 |
AKT3 |
"v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)" |
| 10001_at |
18 |
10001 |
MED6 |
mediator complex subunit 6 |
| 10002_at |
19 |
10002 |
NR2E3 |
"nuclear receptor subfamily 2, group E, member 3" |
| 10003_at |
11 |
10003 |
NAALAD2 |
N-acetylated alpha-linked acidic dipeptidase 2 |
| 100048912_at |
14 |
100048912 |
CDKN2B-AS1 |
CDKN2B antisense RNA 1 |
| 100049716_at |
18 |
100049716 |
LOC100049716 |
uncharacterized LOC100049716 |
| 10004_at |
19 |
10004 |
NAALADL1 |
N-acetylated alpha-linked acidic dipeptidase-like 1 |
| 10005_at |
9 |
10005 |
ACOT8 |
acyl-CoA thioesterase 8 |
| 10006_at |
18 |
10006 |
ABI1 |
abl-interactor 1 |
| 10007_at |
11 |
10007 |
GNPDA1 |
glucosamine-6-phosphate deaminase 1 |
| 10008_at |
28 |
10008 |
KCNE3 |
"potassium voltage-gated channel, Isk-related family, member 3" |
| 100093630_at |
8 |
100093630 |
SNHG8 |
small nucleolar RNA host gene 8 (non-protein coding) |
| 10009_at |
17 |
10009 |
ZBTB33 |
zinc finger and BTB domain containing 33 |
| 1000_at |
17 |
1000 |
CDH2 |
"cadherin 2, type 1, N-cadherin (neuronal)" |
| 100101467_at |
17 |
100101467 |
ZSCAN30 |
zinc finger and SCAN domain containing 30 |
| 100101938_at |
6 |
100101938 |
ANKRD26P3 |
ankyrin repeat domain 26 pseudogene 3 |
| 10010_at |
28 |
10010 |
TANK |
TRAF family member-associated NFKB activator |
| 100113407_at |
9 |
100113407 |
TMEM170B |
transmembrane protein 170B |
| 10011_at |
17 |
10011 |
SRA1 |
steroid receptor RNA activator 1 |
Total number of rows: 18837
Table truncated, full table size 1124 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL19309_HTHGU133PlusPM_Hs_ENTREZG.cdf.gz |
4.2 Mb |
(ftp)(http) |
CDF |
| GPL19309_HTHGU133PlusPM_Hs_ENTREZG_desc.txt.gz |
223.2 Kb |
(ftp)(http) |
TXT |
| GPL19309_HTHGU133PlusPM_Hs_ENTREZG_mapping.txt.gz |
2.1 Mb |
(ftp)(http) |
TXT |
| GPL19309_HTHGU133PlusPM_Hs_ENTREZG_probe_tab.txt.gz |
3.8 Mb |
(ftp)(http) |
TXT |
|
|
|
|
 |
Less...
More...