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Status
Public on Sep 29, 2011
Title
Agilent 45K CpG Island microarrays
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
Same as GEO platform GPL9767
Description
a subset of the GPL9767 - Agilent 244K CpG Island microarray
Submission date
Mar 30, 2011
Last update date
Sep 29, 2011
Contact name
Reshmi Chowdhury
Organization name
UCLA
Department
Neuro-Oncology
Lab
Albert Lai Lab
Street address
635 Charles E. Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Samples (40)
GSM699687 , GSM699688 , GSM699689 , GSM699690 , GSM699691 , GSM699692
GSM699693 ,
GSM699694 ,
GSM699695 ,
GSM699696 ,
GSM699697 ,
GSM699698 ,
GSM699699 ,
GSM699700 ,
GSM699701 ,
GSM699702 ,
GSM699703 ,
GSM699704 ,
GSM699705 ,
GSM699706 ,
GSM699707 ,
GSM699708 ,
GSM699709 ,
GSM699710 ,
GSM699711 ,
GSM699712 ,
GSM699713 ,
GSM699714 ,
GSM699715 ,
GSM699716 ,
GSM699717 ,
GSM699718 ,
GSM699719 ,
GSM699720 ,
GSM699721 ,
GSM699722 ,
GSM699723 ,
GSM699724 ,
GSM699725 ,
GSM699726 Series (1)
GSE28271 Isocitrate dehydrogenase 1 (IDH1) mutant gliomas demonstrate a distinct global CpG island methylation profile compared to IDH1 wildtype gliomas using MRSE
Relations Alternative to
GPL9767
Data table header descriptions ID CHR Chromosome Number
RANGE_GB NCBI build 35 accession version
RANGE_START Start Position (Base Pair) On Chromosome
RANGE_END End Position (Base Pair) On Chromosome
ORF Agilent Probe ID SPOT_ID
Data table ID CHR RANGE_GB RANGE_START RANGE_END ORF Agilent Probe ID SPOT_ID 1:000795050-000796336
1
NC_000001.8
795050
796336
A_17_P00000030
ENST00000326678
1:000829253-000830517
1
NC_000001.8
829253
830517
A_17_P15006591
ENST00000344179
1:000831906-000835774
1
NC_000001.8
831906
835774
A_17_P15006611
ENST00000344179
1:000835775-000836593
1
NC_000001.8
835775
836593
A_17_P15006612
ENST00000344179
1:000844283-000844746
1
NC_000001.8
844283
844746
SAMD11 A_17_P00000131
1:000848450-000849553
1
NC_000001.8
848450
849553
SAMD11 A_17_P15006650
1:000849554-000851763
1
NC_000001.8
849554
851763
SAMD11 A_17_P00000177
1:000859186-000860935
1
NC_000001.8
859186
860935
SAMD11 A_17_P15006700
1:000860936-000861489
1
NC_000001.8
860936
861489
SAMD11 A_17_P15006703
1:000861689-000861993
1
NC_000001.8
861689
861993
SAMD11 A_17_P00000246
1:000865601-000865911
1
NC_000001.8
865601
865911
SAMD11 A_17_P15006726
1:000865912-000866657
1
NC_000001.8
865912
866657
SAMD11 A_17_P00000276
1:000866658-000868095
1
NC_000001.8
866658
868095
SAMD11 A_17_P15006744
1:000868096-000868319
1
NC_000001.8
868096
868319
SAMD11 A_17_P15006746
1:000876161-000877059
1
NC_000001.8
876161
877059
NOC2L A_17_P15006781
1:000883982-000884290
1
NC_000001.8
883982
884290
NOC2L A_17_P15006819
1:000884291-000885506
1
NC_000001.8
884291
885506
NOC2L A_17_P15006831
1:000885617-000885757
1
NC_000001.8
885617
885757
NOC2L-KLHL17 A_17_P15006834
1:000885758-000886253
1
NC_000001.8
885758
886253
NOC2L-KLHL17 A_17_P15006837
1:000886254-000887525
1
NC_000001.8
886254
887525
KLHL17 A_17_P00000361
45094 3488 Kbytes .Supplementary data files not provided
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