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Platform GPL13329 Query DataSets for GPL13329
Status Public on Mar 26, 2011
Title TaqMan(r) Array Human MicroRNA B Cards v2.0
Technology type RT-PCR
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Applied Biosystems
Manufacture protocol See manufacturer's website (http://www.appliedbiosystems.com/).
Catalog number 4398966
 
 
Submission date Mar 25, 2011
Last update date Mar 26, 2011
Contact name James F Reid
E-mail(s) james.reid@ifom-ieo-campus.it
Organization name Fondazione Istituto FIRC di Oncologia Molecolare
Department Molecular Genetics of Cancer
Lab Cancer genomics
Street address Via Adamello, 16
City Milano
ZIP/Postal code 20139
Country Italy
 
Samples (119) GSM701291, GSM701292, GSM701293, GSM701294, GSM701295, GSM701296 
Series (5)
GSE28364 MicroRNA profiling in colorectal cancer highlights miR-1 involvement in MET-dependent proliferation
GSE28659 High resolution microRNA signatures in human whole saliva
GSE37766 Identification of tissue microRNAs predictive of sutinib activity in patients with metastatic renal cell carcinoma

Data table header descriptions
ID
Well card well
Port card port (lane)
Detector detector name (assay name + part number)
Task type of assay (target or Endogenous Control)
Part Number assay part number
AB Assay ID assay id
SEQUENCE
Assay Name assay name
miRNA_ID
SPOT_ID

Data table
ID Well Port Detector Task Part Number AB Assay ID SEQUENCE Assay Name miRNA_ID SPOT_ID
1.hsa-miR-30a*-4373062 1 Port1 hsa-miR-30a*-4373062 Target 4373062 416 CUUUCAGUCGGAUGUUUGCAGC hsa-miR-30a-3p hsa-miR-30a-3p
2.hsa-miR-30e*-4373057 2 Port1 hsa-miR-30e*-4373057 Target 4373057 422 CUUUCAGUCGGAUGUUUACAGC hsa-miR-30e-3p hsa-miR-30e-3p
3.hsa-miR-34b*-4373037 3 Port1 hsa-miR-34b*-4373037 Target 4373037 427 UAGGCAGUGUCAUUAGCUGAUUG hsa-miR-34b hsa-miR-34b
4.hsa-miR-126*-4373269 4 Port1 hsa-miR-126*-4373269 Target 4373269 451 CAUUAUUACUUUUGGUACGCG hsa-miR-126* hsa-miR-126*
5.hsa-miR-154*-4378065 5 Port1 hsa-miR-154*-4378065 Target 4378065 478 AAUCAUACACGGUUGACCUAUU hsa-miR-154* hsa-miR-154*
6.hsa-miR-182*-4378066 6 Port1 hsa-miR-182*-4378066 Target 4378066 483 UGGUUCUAGACUUGCCAACUA hsa-miR-182* hsa-miR-182*
7.hsa-miR-181a*-4373086 7 Port1 hsa-miR-181a*-4373086 Target 4373086 516 ACCAUCGACCGUUGAUUGUACC hsa-miR-213 hsa-miR-213
8.hsa-miR-302c*-4373277 8 Port1 hsa-miR-302c*-4373277 Target 4373277 534 UUUAACAUGGGGGUACCUGCUG hsa-miR-302c* hsa-miR-302c*
9.hsa-miR-373*-4373279 9 Port1 hsa-miR-373*-4373279 Target 4373279 562 ACUCAAAAUGGGGGCGCUUUCC hsa-miR-373* hsa-miR-373*
10.hsa-miR-378*-4373024 10 Port1 hsa-miR-378*-4373024 Target 4373024 567 CUCCUGACUCCAGGUCCUGUGU hsa-miR-378 hsa-miR-378
11.MammU6-4395470 11 Port1 MammU6-4395470 Endogenous Control 4395470 1973 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG U6 snRNA U6 snRNA
12.MammU6-4395470 12 Port1 MammU6-4395470 Endogenous Control 4395470 1973 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG U6 snRNA U6 snRNA
13.hsa-miR-380*-4373021 13 Port1 hsa-miR-380*-4373021 Target 4373021 570 UGGUUGACCAUAGAACAUGCGC hsa-miR-380-5p hsa-miR-380-5p
14.hsa-miR-200a*-4373273 14 Port1 hsa-miR-200a*-4373273 Target 4373273 1011 CAUCUUACCGGACAGUGCUGGA hsa-miR-200a* hsa-miR-200a*
15.hsa-miR-432*-4378076 15 Port1 hsa-miR-432*-4378076 Target 4378076 1027 CUGGAUGGCUCCUCCAUGUCU hsa-miR-432* hsa-miR-432*
16.hsa-miR-493*-4373218 16 Port1 hsa-miR-493*-4373218 Target 4373218 1040 UUGUACAUGGUAGGCUUUCAUU hsa-miR-493 hsa-miR-493
17.hsa-miR-500*-4373225 17 Port1 hsa-miR-500*-4373225 Target 4373225 1046 AUGCACCUGGGCAAGGAUUCUG hsa-miR-500 hsa-miR-500
18.hsa-miR-488*-4373213 18 Port1 hsa-miR-488*-4373213 Target 4373213 1106 CCCAGAUAAUGGCACUCUCAA hsa-miR-488 hsa-miR-488
19.hsa-miR-517*-4378078 19 Port1 hsa-miR-517*-4378078 Target 4378078 1113 CCUCUAGAUGGAAGCACUGUCU hsa-miR-517* hsa-miR-517*
20.hsa-miR-518c*-4378082 20 Port1 hsa-miR-518c*-4378082 Target 4378082 1158 UCUCUGGAGGGAAGCACUUUCUG hsa-miR-518c* hsa-miR-518c*

Total number of rows: 384

Table truncated, full table size 48 Kbytes.




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