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    Tsp_08728 dystrobrevin-1 [ Trichinella spiralis ]

    Gene ID: 10897743, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Tsp_08728
    Gene description
    dystrobrevin-1
    Locus tag
    Tsp_08728
    Gene type
    protein coding
    RNA name
    dystrobrevin-1
    RefSeq status
    PROVISIONAL
    Organism
    Trichinella spiralis (strain: ISS 195)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_003526945.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003526945.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    dystrobrevin-1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003526945.1 Reference assembly

      Range
      4156412..4158028 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003373953.1 → XP_003374001.1  dystrobrevin-1 [Trichinella spiralis]

      See identical proteins and their annotated locations for XP_003374001.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E5SN17
      Conserved Domains (3) summary
      cd02334
      Location:225 → 273
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      pfam09068
      Location:9 → 124
      EF-hand_2; EF hand
      pfam09069
      Location:128 → 216
      EF-hand_3; EF-hand
    Nucleotide Protein
    Heading Accession and Version

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