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    AFF2 ALF transcription elongation factor 2 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100356143, updated on 3-Apr-2024

    Summary

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    Gene symbol
    AFF2
    Gene description
    ALF transcription elongation factor 2
    See related
    Ensembl:ENSOCUG00000013873
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See AFF2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259152.1 (12040159..12635886)

    NW_026259152.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127487113 Neighboring gene derlin-2-like Neighboring gene uncharacterized LOC127487104 Neighboring gene uncharacterized LOC127487103 Neighboring gene iduronate 2-sulfatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259152 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AF4/FMR2 family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259152.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      12040159..12635886
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051831606.1 → XP_051687566.1  AF4/FMR2 family member 2 isoform X1

    2. XM_051831607.1 → XP_051687567.1  AF4/FMR2 family member 2 isoform X3

    3. XM_008273461.3 → XP_008271683.1  AF4/FMR2 family member 2 isoform X2

      UniProtKB/TrEMBL
      A0A5F9CXC1
      Related
      ENSOCUP00000011943.3
      Conserved Domains (1) summary
      pfam05110
      Location:19 → 1295
      AF-4; AF-4 proto-oncoprotein

    4. XM_051831608.1 → XP_051687568.1  AF4/FMR2 family member 2 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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