The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCz11 Primary Assembly

Genomic

1. NC_007114.7 Reference GRCz11 Primary Assembly

   Range

   60044422..60056506

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_017354852.2 → XP_017210341.1  uncharacterized protein zgc:113265 isoform X1

   UniProtKB/TrEMBL

   A0A8M6Z5T1

   Conserved Domains (5) summary

   cd01644
   Location:971 → 1191

   RT_pepA17; RT_pepA17: Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...

   pfam03564
   Location:342 → 461

   DUF1759; Protein of unknown function (DUF1759)

   pfam05380
   Location:1205 → 1365

   Peptidase_A17; Pao retrotransposon peptidase

   pfam16515
   Location:29 → 110

   HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1

   cl21549
   Location:1694 → 1786

   rve; Integrase core domain

2. XM_017354851.2 → XP_017210340.1  uncharacterized protein zgc:113265 isoform X1

   UniProtKB/TrEMBL

   A0A8M6Z5T1

   Conserved Domains (5) summary

   cd01644
   Location:971 → 1191

   RT_pepA17; RT_pepA17: Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...

   pfam03564
   Location:342 → 461

   DUF1759; Protein of unknown function (DUF1759)

   pfam05380
   Location:1205 → 1365

   Peptidase_A17; Pao retrotransposon peptidase

   pfam16515
   Location:29 → 110

   HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1

   cl21549
   Location:1694 → 1786

   rve; Integrase core domain

3. XM_021474766.1 → XP_021330441.1  gastrula zinc finger protein XlCGF8.2DB isoform X2

   UniProtKB/TrEMBL

   A0A8M9Q5L1

   Conserved Domains (2) summary

   COG5048
   Location:34 → 312

   COG5048; FOG: Zn-finger [General function prediction only]

   sd00017
   Location:38 → 58

   ZF_C2H2; C2H2 Zn finger [structural motif]

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

1. NM_001014311.1: Suppressed sequence

   Description

   NM_001014311.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF808 (GeneID:388558).