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    ASB16 ankyrin repeat and SOCS box containing 16 [ Canis lupus familiaris (dog) ]

    Gene ID: 490940, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ASB16provided by VGNC
    Official Full Name
    ankyrin repeat and SOCS box containing 16provided by VGNC
    Primary source
    VGNC:VGNC:38160
    See related
    Ensembl:ENSCAFG00845009148
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ASB16 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (19913771..19922351, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (18608825..18617401, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (19095163..19103740, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (18767286..18775726, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (18949706..18958789, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene ataxin 7 like 3 Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene homologous recombination factor with OB-fold Neighboring gene histone deacetylase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of delayed rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuronal action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon initial segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      19913771..19922351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038676286.1 → XP_038532214.1  ankyrin repeat and SOCS box protein 16

      UniProtKB/TrEMBL
      A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
      Related
      ENSCAFP00845012532.1, ENSCAFT00845016113.1
      Conserved Domains (4) summary
      COG0666
      Location:114 → 252
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03716
      Location:406 → 447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:114 → 140
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:214 → 308
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      18767286..18775726 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038485366.1 → XP_038341294.1  ankyrin repeat and SOCS box protein 16

      Conserved Domains (4) summary
      COG0666
      Location:114 → 252
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03716
      Location:406 → 447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:114 → 140
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:214 → 308
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      18949706..18958789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611102.1 → XP_038467030.1  ankyrin repeat and SOCS box protein 16

      Conserved Domains (4) summary
      COG0666
      Location:114 → 252
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03716
      Location:406 → 447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:114 → 140
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:214 → 308
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      19095163..19103740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038547133.1 → XP_038403061.1  ankyrin repeat and SOCS box protein 16

      UniProtKB/TrEMBL
      A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
      Conserved Domains (4) summary
      COG0666
      Location:114 → 252
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03716
      Location:406 → 447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:114 → 140
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:214 → 308
      Ank_2; Ankyrin repeats (3 copies)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18608825..18617401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_548063.6 → XP_548063.2  ankyrin repeat and SOCS box protein 16

      UniProtKB/TrEMBL
      A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
      Conserved Domains (4) summary
      COG0666
      Location:114 → 252
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03716
      Location:406 → 447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:114 → 140
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:214 → 308
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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