SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: SNRNP200provided by VGNC
Official Full Name: small nuclear ribonucleoprotein U5 subunit 200provided by VGNC
Primary source: VGNC:VGNC:35068
See related: BGD:BT17852; Ensembl:ENSBTAG00000000848
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: ASCC3L1
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 11

Exon count:: 45

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	11	NC_037338.1 (2375182..2400447, complement)

Chromosome 11 - NC_037338.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

MARC4013-4014 (e-PCR)
- UniSTS:207114

MARC_4013-4014:996679276:1 (e-PCR)
- UniSTS:269306

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: U5 small nuclear ribonucleoprotein 200 kDa helicase

Names: activating signal cointegrator 1 complex subunit 3-like 1; small nuclear ribonucleoprotein 200kDa (U5)

NP_001193092.1

EC 3.6.4.13

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001206163.2 → NP_001193092.1 U5 small nuclear ribonucleoprotein 200 kDa helicase

See identical proteins and their annotated locations for NP_001193092.1

Status: PROVISIONAL

Source sequence(s)

DV895990, EH174343, NKLS02000011

UniProtKB/TrEMBL

E1BH78

Related

ENSBTAP00000001130.5, ENSBTAT00000001130.6

Conserved Domains (3) summary

smart00611
Location:1809 → 2125

SEC63; Domain of unknown function in Sec63p, Brr2p and other proteins

COG1204
Location:452 → 1241

BRR2; Replicative superfamily II helicase [Replication, recombination and repair]

cl28231
Location:1297 → 1972

BRR2; Replicative superfamily II helicase [Replication, recombination and repair]