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ASB16 ankyrin repeat and SOCS box containing 16 [ Canis lupus familiaris (dog) ]

Gene ID: 490940, updated on 5-Mar-2024

Summary

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Official Symbol
ASB16provided by VGNC
Official Full Name
ankyrin repeat and SOCS box containing 16provided by VGNC
Primary source
VGNC:VGNC:38160
See related
Ensembl:ENSCAFG00845009148
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (19913771..19922351, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (18608825..18617401, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (19095163..19103740, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (18767286..18775726, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (18949706..18958789, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene ataxin 7 like 3 Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene homologous recombination factor with OB-fold Neighboring gene histone deacetylase 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of delayed rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuronal action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon initial segment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    19913771..19922351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038676286.1 → XP_038532214.1  ankyrin repeat and SOCS box protein 16

    UniProtKB/TrEMBL
    A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
    Related
    ENSCAFP00845012532.1, ENSCAFT00845016113.1
    Conserved Domains (4) summary
    COG0666
    Location:114 → 252
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03716
    Location:406 → 447
    SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
    sd00045
    Location:114 → 140
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:214 → 308
    Ank_2; Ankyrin repeats (3 copies)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    18767286..18775726 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038485366.1 → XP_038341294.1  ankyrin repeat and SOCS box protein 16

    Conserved Domains (4) summary
    COG0666
    Location:114 → 252
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03716
    Location:406 → 447
    SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
    sd00045
    Location:114 → 140
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:214 → 308
    Ank_2; Ankyrin repeats (3 copies)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    18949706..18958789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038611102.1 → XP_038467030.1  ankyrin repeat and SOCS box protein 16

    Conserved Domains (4) summary
    COG0666
    Location:114 → 252
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03716
    Location:406 → 447
    SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
    sd00045
    Location:114 → 140
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:214 → 308
    Ank_2; Ankyrin repeats (3 copies)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    19095163..19103740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038547133.1 → XP_038403061.1  ankyrin repeat and SOCS box protein 16

    UniProtKB/TrEMBL
    A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
    Conserved Domains (4) summary
    COG0666
    Location:114 → 252
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03716
    Location:406 → 447
    SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
    sd00045
    Location:114 → 140
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:214 → 308
    Ank_2; Ankyrin repeats (3 copies)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    18608825..18617401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_548063.6 → XP_548063.2  ankyrin repeat and SOCS box protein 16

    UniProtKB/TrEMBL
    A0A8C0KCV2, A0A8C0M137, A0A8C0Z014, A0A8I3N716
    Conserved Domains (4) summary
    COG0666
    Location:114 → 252
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03716
    Location:406 → 447
    SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
    sd00045
    Location:114 → 140
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:214 → 308
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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