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ak1 adenylate kinase 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448536, updated on 25-Apr-2024

Summary

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Official Symbol
ak1provided by Xenbase
Official Full Name
adenylate kinase 1provided by Xenbase
Primary source
Xenbase:XB-GENE-1012039
See related
Ensembl:ENSXETG00000021999
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ak5; ak1-a; ak1-b
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (24410753..24472664)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (2446375..2507695, complement)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Neighboring gene endoglin Neighboring gene folylpolyglutamate synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC79778

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables adenylate kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleoside diphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ADP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within AMP metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ATP metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within nucleoside triphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
adenylate kinase isoenzyme 1
NP_001006817.1
XP_031746217.1
XP_031746218.1
XP_031746219.1
XP_031746220.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006816.2 → NP_001006817.1  adenylate kinase isoenzyme 1

    See identical proteins and their annotated locations for NP_001006817.1

    Status: PROVISIONAL

    Source sequence(s)
    CR855821
    UniProtKB/TrEMBL
    A0A6I8PZ79, Q6DFN0
    Related
    ENSXETP00000047632.4, ENSXETT00000047632.5
    Conserved Domains (1) summary
    TIGR01360
    Location:6 → 193
    aden_kin_iso1; adenylate kinase, isozyme 1 subfamily

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    24410753..24472664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031890357.1 → XP_031746217.1  adenylate kinase isoenzyme 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J1IL77
    Conserved Domains (1) summary
    TIGR01360
    Location:378 → 565
    aden_kin_iso1; adenylate kinase, isozyme 1 subfamily

  2. XM_031890360.1 → XP_031746220.1  adenylate kinase isoenzyme 1 isoform X3

    UniProtKB/TrEMBL
    A0A6I8PZ79, Q6DFN0
    Related
    ENSXETP00000104880.1, ENSXETT00000118974.1
    Conserved Domains (1) summary
    TIGR01360
    Location:6 → 193
    aden_kin_iso1; adenylate kinase, isozyme 1 subfamily

  3. XM_031890359.1 → XP_031746219.1  adenylate kinase isoenzyme 1 isoform X3

    UniProtKB/TrEMBL
    A0A6I8PZ79, Q6DFN0
    Conserved Domains (1) summary
    TIGR01360
    Location:6 → 193
    aden_kin_iso1; adenylate kinase, isozyme 1 subfamily

  4. XM_031890358.1 → XP_031746218.1  adenylate kinase isoenzyme 1 isoform X2

    UniProtKB/TrEMBL
    A0A6I8PZ79, A0A6I8QVF9
    Related
    ENSXETP00000076252.2, ENSXETT00000085055.2
    Conserved Domains (1) summary
    TIGR01360
    Location:24 → 211
    aden_kin_iso1; adenylate kinase, isozyme 1 subfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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