abce1 ATP binding cassette subfamily E member 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: abce1provided by Xenbase
Official Full Name: ATP binding cassette subfamily E member 1provided by Xenbase
Primary source: Xenbase:XB-GENE-993988
See related: Ensembl:ENSXETG00000025168
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (59057219..59073887)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (49658291..49673797)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ATP-binding cassette sub-family E member 1

Names: ATP-binding cassette, sub-family E (OABP), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005628.1 → NP_001005628.1 ATP-binding cassette sub-family E member 1

See identical proteins and their annotated locations for NP_001005628.1

Status: PROVISIONAL

Source sequence(s)

BC074613

UniProtKB/TrEMBL

A0A803JEJ9, F6UE47, F6X4K5, Q6GL91

Related

ENSXETP00000053891.3, ENSXETT00000053891.4

Conserved Domains (1) summary

COG1245
Location:4 → 597

Rli1; Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains [Translation, ribosomal structure and biogenesis]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

59057219..59073887

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031897540.1 → XP_031753400.1 ATP-binding cassette sub-family E member 1 isoform X1

UniProtKB/TrEMBL

A0A803JEJ9, F6UE47, F6X4K5, Q6GL91

Conserved Domains (1) summary

COG1245
Location:4 → 597

Rli1; Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains [Translation, ribosomal structure and biogenesis]