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abcA11 ABC transporter A family protein [ Cavenderia fasciculata ]

Gene ID: 14874958, updated on 28-Dec-2023

Summary

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Gene symbol
abcA11
Gene description
ABC transporter A family protein
Locus tag
DFA_05874
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavenderia fasciculata (isolate: SH3)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
8

NW_004457735.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA nucleotidyltransferase Neighboring gene Hypothetical UPF0293 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457735.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sorocarp morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABC transporter A family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457735.1 Reference assembly

    Range
    2713182..2716214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004361534.1 → XP_004361591.1  ABC transporter A family protein [Cavenderia fasciculata]

    See identical proteins and their annotated locations for XP_004361591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4PN50
    Conserved Domains (3) summary
    cd03263
    Location:439 → 648
    ABC_subfamily_A; ATP-binding cassette domain of the lipid transporters, subfamily A
    COG1131
    Location:440 → 735
    CcmA; ABC-type multidrug transport system, ATPase component [Defense mechanisms]
    pfam12698
    Location:27 → 369
    ABC2_membrane_3; ABC-2 family transporter protein
Nucleotide Protein
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Molecular Biology Databases