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ABTB1 ankyrin repeat and BTB domain containing 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120368724, updated on 21-Mar-2024

Summary

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Gene symbol
ABTB1
Gene description
ankyrin repeat and BTB domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 7 NC_052629.1 (104050445..104092117, complement)

Linkage Group 7 - NC_052629.1Genomic Context describing neighboring genes Neighboring gene SEC61 translocon subunit alpha 1 Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene monoglyceride lipase Neighboring gene podocalyxin like 2 Neighboring gene minichromosome maintenance complex component 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052629.1 Chromosome 7 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and BTB/POZ domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052629.1 Reference ASM1616193v1 Primary Assembly

    Range
    104050445..104092117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039481162.1 → XP_039337096.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1

    Conserved Domains (5) summary
    sd00045
    Location:1 → 33
    ANK; ANK repeat [structural motif]
    cd18295
    Location:96 → 214
    BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18296
    Location:253 → 376
    BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18497
    Location:375 → 446
    BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    pfam12796
    Location:6 → 65
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_039481163.1 → XP_039337097.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X2

    Conserved Domains (5) summary
    sd00045
    Location:1 → 33
    ANK; ANK repeat [structural motif]
    cd18295
    Location:96 → 214
    BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18296
    Location:253 → 376
    BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    pfam12796
    Location:6 → 65
    Ank_2; Ankyrin repeats (3 copies)
    cl28903
    Location:375 → 412
    BACK; BACK (BTB and C-terminal Kelch) domain
Nucleotide Protein
Heading Accession and Version

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