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asb7 ankyrin repeat and SOCS box containing 7 [ Cyprinodon tularosa ]

Gene ID: 119797669, updated on 21-Mar-2024

Summary

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Gene symbol
asb7
Gene description
ankyrin repeat and SOCS box containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon tularosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1607723v1 (GCF_016077235.1) Unplaced Scaffold NW_024039333.1 (442593..467938, complement)

NW_024039333.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat kinase 1 Neighboring gene aldehyde dehydrogenase 1 family, member A3 Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene lines homolog 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024039333 Unplaced Scaffold Reference ASM1607723v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon tularosa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607723v1

Genomic

  1. NW_024039333.1 Reference ASM1607723v1

    Range
    442593..467938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038306843.1 → XP_038162771.1  ankyrin repeat and SOCS box protein 7 isoform X2

    Conserved Domains (5) summary
    PHA02884
    Location:197 → 327
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:56 → 196
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:286 → 329
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:94 → 127
    ANK; ANK repeat [structural motif]
    cl39094
    Location:1 → 102
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_038306841.1 → XP_038162769.1  ankyrin repeat and SOCS box protein 7 isoform X1

    Conserved Domains (3) summary
    PHA02875
    Location:46 → 232
    PHA02875; ankyrin repeat protein; Provisional
    cd03726
    Location:298 → 341
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:106 → 139
    ANK; ANK repeat [structural motif]

  3. XM_038306842.1 → XP_038162770.1  ankyrin repeat and SOCS box protein 7 isoform X2

    Conserved Domains (5) summary
    PHA02884
    Location:197 → 327
    PHA02884; ankyrin repeat protein; Provisional
    COG0666
    Location:56 → 196
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd03726
    Location:286 → 329
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:94 → 127
    ANK; ANK repeat [structural motif]
    cl39094
    Location:1 → 102
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_038306840.1 → XP_038162768.1  ankyrin repeat and SOCS box protein 7 isoform X1

    Conserved Domains (3) summary
    PHA02875
    Location:46 → 232
    PHA02875; ankyrin repeat protein; Provisional
    cd03726
    Location:298 → 341
    SOCS_ASB7; SOCS (suppressors of cytokine signaling) box of ASB7-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The ...
    sd00045
    Location:106 → 139
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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